Prognostic and Functional Analysis of NPY6R in Uveal Melanoma Using Bioinformatics

被引:9
作者
Mei, ShiMin [1 ]
Li, Yue [2 ]
Kang, Xueran [3 ]
机构
[1] Tongji Univ, Shanghai Peoples Hosp 4, Sch Med, Dept Ophthalmol, Shanghai 200434, Peoples R China
[2] Tongji Univ, Yangpu Hosp, Sch Med, Dept Gen Surg, Shanghai 200090, Peoples R China
[3] Shanghai Jiao Tong Univ, Shanghai Peoples Hosp 9, Sch Med, Dept Otorhinolaryngol Head & Neck Surg, Shanghai, Peoples R China
关键词
NEUROPEPTIDE-Y; R PACKAGE; EXPRESSION; RECEPTOR; OUTCOMES; PATHWAY; GENOME; GROWTH; CELLS;
D O I
10.1155/2022/4143447
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Neuropeptides can mediate tumor cell proliferation and differentiation through autocrine, paracrine, neurosecretory, and endocrine mechanisms. This study investigated the expression and prognostic significance of neuropeptide Y receptor Y6 (NPY6R) in uveal melanoma (UVM) and preliminarily investigated the biological function of NPY6R in UVM. NPY6R was poorly expressed in most tumors and was associated with better prognosis in UVM. Among the clinicopathological features of UVM, NPY6R expression was lower in male patients. The area under the curve (AUC) value of NPY6R for the diagnosis of UVM was 0.676 (95% CI: 0.556-0.795). A nomogram including four clinical predictors was constructed. NPY6R expression was significantly associated with features of the UVM immune microenvironment. ESTIMATE and CIBERSORT algorithms were used to calculate the fraction of immune cells and the percentage of infiltration in each patient, respectively. NPY6R expression-related gene ontology (GO), Kyoto Encyclopedia of Genes and Genomes (KEGG), and gene set enrichment analyses were performed. GO and KEGG enrichment analyses revealed that NPY6R-related genes are mainly enriched in pathways and functions related to visual light perception. Gene set enrichment analysis suggested that NPY6R is associated with tumor progression in UVM. NPY6R is involved in the tumor progression of UVM and has a good predictive value as a prognostic marker of UVM.
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页数:14
相关论文
共 64 条
[1]   A Testosterone Metabolite 19-Hydroxyandrostenedione Induces Neuroendocrine Trans-Differentiation of Prostate Cancer Cells via an Ectopic Olfactory Receptor [J].
Abaffy, Tatjana ;
Bain, James R. ;
Muehlbauer, Michael J. ;
Spasojevic, Ivan ;
Lodha, Shweta ;
Bruguera, Elisa ;
O'Neal, Sara K. ;
Kim, So Young ;
Matsunami, Hiroaki .
FRONTIERS IN ONCOLOGY, 2018, 8
[2]   Clinical Outcomes in Metastatic Uveal Melanoma Treated With PD-1 and PD-L1 Antibodies [J].
Algazi, Alain P. ;
Tsai, Katy K. ;
Shoushtari, Alexander N. ;
Munhoz, Rodrigo R. ;
Eroglu, Zeynep ;
Piulats, Josep M. ;
Ott, Patrick A. ;
Johnson, Douglas B. ;
Hwang, Jimmy ;
Daud, Adil I. ;
Sosman, Jeffrey A. ;
Carvajal, Richard D. ;
Chmielowski, Bartosz ;
Postow, Michael A. ;
Weber, Jeffrey S. ;
Sullivan, Ryan J. .
CANCER, 2016, 122 (21) :3344-3353
[3]   Inhibitory Role of the Mud Crab Short Neuropeptide F in Vitellogenesis and Oocyte Maturation via Autocrine/Paracrine Signaling [J].
Bao, Chenchang ;
Yang, Yanan ;
Huang, Huiyang ;
Ye, Haihui .
FRONTIERS IN ENDOCRINOLOGY, 2018, 9
[4]  
BARR CC, 1981, ARCH OPHTHALMOL-CHIC, V99, P2133
[5]   Neuropeptides: Roles and Activities as Metal Chelators in Neurodegenerative Diseases [J].
Ben-Shushan, Shira ;
Miller, Yifat .
JOURNAL OF PHYSICAL CHEMISTRY B, 2021, 125 (11) :2796-2811
[6]  
Bergua A, 1996, ANAT EMBRYOL, V193, P239
[7]   Adjuvant Dendritic Cell Vaccination in High-Risk Uveal Melanoma [J].
Bol, Kalijn F. ;
Van den Bosch, Thomas ;
Schreibelt, Gerty ;
Mensink, Hanneke W. ;
Keunen, Jan E. E. ;
Kilic, Emine ;
Japing, Wouter J. ;
Geul, Kaspar W. ;
Westdorp, Harm ;
Boudewijns, Steve ;
Croockewit, Sandra A. J. ;
Van Rossum, Michelle M. ;
De Goede, Anna L. ;
Naus, Nicole C. ;
Van der Graaf, Winette T. A. ;
Gerritsen, Winald R. ;
De Klein, Annelies ;
Punt, Cornelis J. A. ;
Figdor, Carl G. ;
Cohen, Victoria M. ;
Paridaens, Dion ;
De Vries, I. Jolanda M. .
OPHTHALMOLOGY, 2016, 123 (10) :2265-+
[8]   Diurnal Variations in Axial Length, Choroidal Thickness, Intraocular Pressure, and Ocular Biometrics [J].
Chakraborty, Ranjay ;
Read, Scott A. ;
Collins, Michael J. .
INVESTIGATIVE OPHTHALMOLOGY & VISUAL SCIENCE, 2011, 52 (08) :5121-5129
[9]   Treatment of metastatic uveal melanoma with adoptive transfer of tumour-infiltrating lymphocytes: a single-centre, two-stage, single-arm, phase 2 study [J].
Chandran, Smita S. ;
Somerville, Robert P. T. ;
Yang, James C. ;
Sherry, Richard M. ;
Klebanoff, Christopher A. ;
Goff, Stephanie L. ;
Wunderlich, John R. ;
Danforth, David N. ;
Zlott, Daniel ;
Paria, Biman C. ;
Sabesan, Arvind C. ;
Srivastava, Abhishek K. ;
Xi, Liqiang ;
Pham, Trinh H. ;
Raffeld, Mark ;
White, Donald E. ;
Toomey, Mary Ann ;
Rosenberg, Steven A. ;
Kammula, Udai S. .
LANCET ONCOLOGY, 2017, 18 (06) :792-802
[10]  
Chen BB, 2018, METHODS MOL BIOL, V1711, P243, DOI 10.1007/978-1-4939-7493-1_12