The burden of typhoid fever in low- and middle-income countries: A meta-regression approach

被引:209
作者
Antillon, Marina [1 ]
Warren, Joshua L. [2 ]
Crawford, Forrest W. [2 ]
Weinberger, Daniel M. [1 ]
Kurum, Esra [3 ]
Pak, Gi Deok [4 ]
Marks, Florian [4 ]
Pitzer, Virginia E. [1 ]
机构
[1] Yale Sch Publ Hlth, Dept Epidemiol Microbial Dis, New Haven, CT 06510 USA
[2] Yale Sch Publ Hlth, Dept Biostat, New Haven, CT USA
[3] Univ Calif Riverside, Dept Stat, Riverside, CA 92521 USA
[4] Int Vaccine Inst, Seoul, South Korea
来源
PLOS NEGLECTED TROPICAL DISEASES | 2017年 / 11卷 / 02期
关键词
SALMONELLA-TYPHI; BONE-MARROW; VARIABLE SELECTION; DRUG-RESISTANCE; BLOOD CULTURE; RISK-FACTORS; EPIDEMIOLOGY; DIAGNOSIS; CHILDREN; SURVEILLANCE;
D O I
10.1371/journal.pntd.0005376
中图分类号
R51 [传染病];
学科分类号
100401 ;
摘要
Background Upcoming vaccination efforts against typhoid fever require an assessment of the baseline burden of disease in countries at risk. There are no typhoid incidence data from most low- and middle-income countries (LMICs), so model-based estimates offer insights for decisionmakers in the absence of readily available data. Methods We developed a mixed-effects model fit to data from 32 population-based studies of typhoid incidence in 22 locations in 14 countries. We tested the contribution of economic and environmental indices for predicting typhoid incidence using a stochastic search variable selection algorithm. We performed out-of-sample validation to assess the predictive performance of the model. Results We estimated that 17.8 million cases of typhoid fever occur each year in LMICs (95% credible interval: 6.9-48.4 million). Central Africa was predicted to experience the highest incidence of typhoid, followed by select countries in Central, South, and Southeast Asia. Incidence typically peaked in the 2-4 year old age group. Models incorporating widely available economic and environmental indicators were found to describe incidence better than null models. Conclusions Recent estimates of typhoid burden may under-estimate the number of cases and magnitude of uncertainty in typhoid incidence. Our analysis permits prediction of overall as well as age-specific incidence of typhoid fever in LMICs, and incorporates uncertainty around the model structure and estimates of the predictors. Future studies are needed to further validate and refine model predictions and better understand year-to-year variation in cases.
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页数:21
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共 53 条
  • [1] A digitized global flood inventory (1998-2008): compilation and preliminary results
    Adhikari, Pradeep
    Hong, Yang
    Douglas, Kimberly R.
    Kirschbaum, Dalia Bach
    Gourley, Jonathan
    Adler, Robert
    Brakenridge, G. Robert
    [J]. NATURAL HAZARDS, 2010, 55 (02) : 405 - 422
  • [2] [Anonymous], 2005, GRIDD POP WORLD VERS
  • [3] Global assessment of exposure to faecal contamination through drinking water based on a systematic review
    Bain, Robert
    Cronk, Ryan
    Hossain, Rifat
    Bonjour, Sophie
    Onda, Kyle
    Wright, Jim
    Yang, Hong
    Slaymaker, Tom
    Hunter, Paul
    Pruess-Ustuen, Annette
    Bartram, Jamie
    [J]. TROPICAL MEDICINE & INTERNATIONAL HEALTH, 2014, 19 (08) : 917 - 927
  • [4] Combined high-resolution genotyping and geospatial analysis reveals modes of endemic urban typhoid fever transmission
    Baker, Stephen
    Holt, Kathryn E.
    Clements, Archie C. A.
    Karkey, Abhilasha
    Arjyal, Amit
    Boni, Maciej F.
    Dongol, Sabina
    Hammond, Naomi
    Koirala, Samir
    Pham Thanh Duy
    Tran Vu Thieu Nga
    Campbell, James I.
    Dolecek, Christiane
    Basnyat, Buddha
    Dougan, Gordon
    Farrar, Jeremy J.
    [J]. OPEN BIOLOGY, 2011, 1
  • [5] Typhoid and paratyphoid fever
    Bhan, MK
    Bahl, R
    Bhatnagar, S
    [J]. LANCET, 2005, 366 (9487) : 749 - 762
  • [6] Impact of age and drug resistance on mortality in typhoid fever
    Bhutta, ZA
    [J]. ARCHIVES OF DISEASE IN CHILDHOOD, 1996, 75 (03) : 214 - 217
  • [7] Bacteremic typhoid fever in children in an urban slum, Bangladesh
    Brooks, WA
    Hossain, A
    Goswami, D
    Sharmeen, AT
    Nahar, K
    Alam, K
    Ahmed, N
    Naheed, A
    Nair, GB
    Luby, S
    Breiman, RF
    [J]. EMERGING INFECTIOUS DISEASES, 2005, 11 (02) : 326 - 329
  • [8] Buckle Geoffrey C, 2012, J Glob Health, V2, P010401, DOI 10.7189/jogh.02.010401
  • [9] Crump JA, 2004, B WORLD HEALTH ORGAN, V82, P346
  • [10] Typhoid Fever and the Challenge of Nonmalaria Febrile Illness in Sub-Saharan Africa
    Crump, John A.
    [J]. CLINICAL INFECTIOUS DISEASES, 2012, 54 (08) : 1107 - 1109