The burden of typhoid fever in low- and middle-income countries: A meta-regression approach

被引:223
作者
Antillon, Marina [1 ]
Warren, Joshua L. [2 ]
Crawford, Forrest W. [2 ]
Weinberger, Daniel M. [1 ]
Kurum, Esra [3 ]
Pak, Gi Deok [4 ]
Marks, Florian [4 ]
Pitzer, Virginia E. [1 ]
机构
[1] Yale Sch Publ Hlth, Dept Epidemiol Microbial Dis, New Haven, CT 06510 USA
[2] Yale Sch Publ Hlth, Dept Biostat, New Haven, CT USA
[3] Univ Calif Riverside, Dept Stat, Riverside, CA 92521 USA
[4] Int Vaccine Inst, Seoul, South Korea
关键词
SALMONELLA-TYPHI; BONE-MARROW; VARIABLE SELECTION; DRUG-RESISTANCE; BLOOD CULTURE; RISK-FACTORS; EPIDEMIOLOGY; DIAGNOSIS; CHILDREN; SURVEILLANCE;
D O I
10.1371/journal.pntd.0005376
中图分类号
R51 [传染病];
学科分类号
100401 ;
摘要
Background Upcoming vaccination efforts against typhoid fever require an assessment of the baseline burden of disease in countries at risk. There are no typhoid incidence data from most low- and middle-income countries (LMICs), so model-based estimates offer insights for decisionmakers in the absence of readily available data. Methods We developed a mixed-effects model fit to data from 32 population-based studies of typhoid incidence in 22 locations in 14 countries. We tested the contribution of economic and environmental indices for predicting typhoid incidence using a stochastic search variable selection algorithm. We performed out-of-sample validation to assess the predictive performance of the model. Results We estimated that 17.8 million cases of typhoid fever occur each year in LMICs (95% credible interval: 6.9-48.4 million). Central Africa was predicted to experience the highest incidence of typhoid, followed by select countries in Central, South, and Southeast Asia. Incidence typically peaked in the 2-4 year old age group. Models incorporating widely available economic and environmental indicators were found to describe incidence better than null models. Conclusions Recent estimates of typhoid burden may under-estimate the number of cases and magnitude of uncertainty in typhoid incidence. Our analysis permits prediction of overall as well as age-specific incidence of typhoid fever in LMICs, and incorporates uncertainty around the model structure and estimates of the predictors. Future studies are needed to further validate and refine model predictions and better understand year-to-year variation in cases.
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页数:21
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