High-quality permanent draft genome sequence of Rhizobium leguminosarum bv. viciae strain GB30; an effective microsymbiont of Pisum sativum growing in Poland

被引：4

作者：

Mazur, Andrzej ^{[1
]}

De Meyer, Sofie E. ^{[2
]}

Tian, Rui ^{[2
]}

Wielbo, Jerzy ^{[1
]}

Zebracki, Kamil ^{[1
]}

Seshadri, Rekha ^{[3
]}

Reddy, T. B. K. ^{[3
]}

Markowitz, Victor ^{[4
]}

Ivanova, Natalia N. ^{[3
]}

Pati, Amrita ^{[3
]}

Woyke, Tanja ^{[3
]}

Kyrpides, Nikos C. ^{[3
,5
]}

Reeve, Wayne ^{[2
]}

机构：

[1] Marie Curie Sklodowska Univ, Dept Genet & Microbiol, Lublin, Poland

[2] Murdoch Univ, Ctr Rhizobium Studies, Murdoch, WA 6150, Australia

[3] DOE Joint Genome Inst, Walnut Creek, CA USA

[4] Univ Calif Berkeley, Lawrence Berkeley Natl Lab, Biol Data Management & Technol Ctr, Berkeley, CA 94720 USA

[5] King Abdulaziz Univ, Dept Biol Sci, Jeddah 21413, Saudi Arabia

来源：

STANDARDS IN GENOMIC SCIENCES | 2015年 / 10卷

关键词：

Root-nodule bacteria; Nitrogen fixation; Rhizobia; Alphaproteobacteria; GEBA-RNB; TRIFOLII; REVISION; BACTERIA; DATABASE; SYSTEM;

D O I：

10.1186/s40793-015-0029-6

中图分类号：

Q3 [遗传学];

学科分类号：

071007 ; 090102 ;

摘要：

Rhizobium leguminosarum bv. viciae GB30 is an aerobic, motile, Gram-negative, non-spore-forming rod that can exist as a soil saprophyte or as a legume microsymbiont of Pisum sativum. GB30 was isolated in Poland from a nodule recovered from the roots of Pisum sativum growing at Janow. GB30 is also an effective microsymbiont of the annual forage legumes vetch and pea. Here we describe the features of R. leguminosarum bv. viciae strain GB30, together with sequence and annotation. The 7,468,464 bp high-quality permanent draft genome is arranged in 78 scaffolds of 78 contigs containing 7,227 protein-coding genes and 75 RNA-only encoding genes, and is part of the GEBA-RNB project proposal.

引用

页数：7

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