Practical Barriers and Ethical Challenges in Genetic Data Sharing

被引:13
|
作者
Simpson, Claire L. [1 ]
Goldenberg, Aaron J. [2 ]
Culverhouse, Rob [3 ]
Daley, Denise [4 ]
Igo, Robert P., Jr. [5 ]
Jarvik, Gail P. [6 ,7 ]
Mandal, Diptasri M. [8 ]
Mascalzoni, Deborah [9 ]
Montgomery, Courtney Gray [10 ]
Pierce, Brandon L. [11 ]
Plaetke, Rosemarie [12 ]
Shete, Sanjay [13 ]
Goddard, Katrina A. B. [14 ]
Stein, Catherine M. [5 ]
机构
[1] Natl Human Genome Res Inst, Computat & Stat Genom Branch, Baltimore, MD 21224 USA
[2] Case Western Reserve Univ, Dept Bioeth, Cleveland, OH 44106 USA
[3] Washington Univ, Dept Internal Med, St Louis, MO 63110 USA
[4] Univ British Columbia, Dept Med, Vancouver, BC V6Z 1Y6, Canada
[5] Case Western Reserve Univ, Dept Epidemiol & Biostat, Cleveland, OH 44106 USA
[6] Univ Washington, Dept Med Med Genet, Seattle, WA 98195 USA
[7] Univ Washington, Dept Genome Sci, Seattle, WA 98195 USA
[8] Louisiana State Univ, Hlth Sci Ctr, Dept Genet, New Orleans, LA 70112 USA
[9] EURAC Inst Genet Med, I-39100 Bolzano, Italy
[10] Oklahoma Med Res Fdn, Oklahoma City, OK 73104 USA
[11] Univ Chicago, Dept Hlth Studies, Chicago, IL 60637 USA
[12] Univ Med Ctr Hamburg Eppendorf, Dept Med Biometry & Epidemiol, D-20246 Hamburg, Germany
[13] Univ Texas MD Anderson Canc Ctr, Houston, TX 77030 USA
[14] Kaiser Permanente Northwest, Ctr Hlth Res, Portland, OR 97227 USA
基金
美国国家卫生研究院;
关键词
data sharing; identifiability; GWAS; ELSI; ethics; publication embargo; collaboration; BLOOD-PRESSURE; ASSOCIATION; INFORMATION; VARIANTS;
D O I
10.3390/ijerph110808383
中图分类号
X [环境科学、安全科学];
学科分类号
08 ; 0830 ;
摘要
The underlying ethos of dbGaP is that access to these data by secondary data analysts facilitates advancement of science. NIH has required that genome-wide association study data be deposited in the Database of Genotypes and Phenotypes (dbGaP) since 2003. In 2013, a proposed updated policy extended this requirement to next-generation sequencing data. However, recent literature and anecdotal reports suggest lingering logistical and ethical concerns about subject identifiability, informed consent, publication embargo enforcement, and difficulty in accessing dbGaP data. We surveyed the International Genetic Epidemiology Society (IGES) membership about their experiences. One hundred and seventy five (175) individuals completed the survey, a response rate of 27%. Of respondents who received data from dbGaP (43%), only 32% perceived the application process as easy but most (75%) received data within five months. Remaining challenges include difficulty in identifying an institutional signing official and an overlong application process. Only 24% of respondents had contributed data to dbGaP. Of these, 31% reported local IRB restrictions on data release; an additional 15% had to reconsent study participants before depositing data. The majority of respondents (56%) disagreed that the publication embargo period was sufficient. In response, we recommend longer embargo periods and use of varied data-sharing models rather than a one-size-fits-all approach.
引用
收藏
页码:8383 / 8398
页数:16
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