Mutation Update for GNE Gene Variants Associated with GNE Myopathy

被引:91
作者
Celeste, Frank V. [1 ]
Vilboux, Thierry [2 ]
Ciccone, Carla [2 ]
de Dios, John Karl [2 ]
Malicdan, May Christine V. [2 ]
Leoyklang, Petcharat [2 ]
McKew, John C. [1 ]
Gahl, William A. [2 ,3 ]
Carrillo-Carrasco, Nuria [1 ]
Huizing, Marjan [2 ]
机构
[1] NIH, Natl Ctr Adv Translat Sci, Bethesda, MD 20892 USA
[2] NHGRI, Med Genet Branch, NIH, Bethesda, MD 20892 USA
[3] NHGRI, Off Clin Director, NIH, Bethesda, MD 20892 USA
基金
美国国家卫生研究院;
关键词
GNE; distal myopathy with rimmed vacuoles; DMRV; hereditary inclusion body myopathy; HIBM; adult onset muscular dystrophy; INCLUSION-BODY MYOPATHY; ACETYLGLUCOSAMINE 2-EPIMERASE/N-ACETYLMANNOSAMINE KINASE; GLCNAC 2-EPIMERASE/MANNAC KINASE; N-ACETYLNEURAMINIC ACID; RIMMED VACUOLES DMRV; DISTAL MYOPATHY; BIFUNCTIONAL ENZYME; KEY ENZYME; HETEROZYGOUS MUTATIONS; MISSENSE MUTATION;
D O I
10.1002/humu.22583
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
The GNE gene encodes the rate-limiting, bifunctional enzyme of sialic acid biosynthesis, uridine diphosphate-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase (GNE). Biallelic GNE mutations underlie GNE myopathy, an adult-onset progressive myopathy. GNE myopathy-associated GNE mutations are predominantly missense, resulting in reduced, but not absent, GNE enzyme activities. The exact pathomechanism of GNE myopathy remains unknown, but likely involves aberrant (muscle) sialylation. Here, we summarize 154 reported and novel GNE variants associated with GNE myopathy, including 122 missense, 11 nonsense, 14 insertion/deletions, and seven intronic variants. All variants were deposited in the online GNE variation database (http://www.dmd.nl/nmdb2/home.php?select_db=GNE). We report the predicted effects on protein function of all variants well as the predicted effects on epimerase and/or kinase enzymatic activities of selected variants. By analyzing exome sequence databases, we identified three frequently occurring, unreported GNE missense variants/polymorphisms, important for future sequence interpretations. Based on allele frequencies, we estimate the world-wide prevalence of GNE myopathy to be similar to 4-21/1,000,000. This previously unrecognized high prevalence confirms suspicions that many patients may escape diagnosis. Awareness among physicians for GNE myopathy is essential for the identification of new patients, which is required for better understanding of the disorder's pathomechanism and for the success of ongoing treatment trials. Published 2014 Wiley Periodicals, Inc.**
引用
收藏
页码:915 / 926
页数:12
相关论文
共 101 条
[1]   A method and server for predicting damaging missense mutations [J].
Adzhubei, Ivan A. ;
Schmidt, Steffen ;
Peshkin, Leonid ;
Ramensky, Vasily E. ;
Gerasimova, Anna ;
Bork, Peer ;
Kondrashov, Alexey S. ;
Sunyaev, Shamil R. .
NATURE METHODS, 2010, 7 (04) :248-249
[2]   An integrated map of genetic variation from 1,092 human genomes [J].
Altshuler, David M. ;
Durbin, Richard M. ;
Abecasis, Goncalo R. ;
Bentley, David R. ;
Chakravarti, Aravinda ;
Clark, Andrew G. ;
Donnelly, Peter ;
Eichler, Evan E. ;
Flicek, Paul ;
Gabriel, Stacey B. ;
Gibbs, Richard A. ;
Green, Eric D. ;
Hurles, Matthew E. ;
Knoppers, Bartha M. ;
Korbel, Jan O. ;
Lander, Eric S. ;
Lee, Charles ;
Lehrach, Hans ;
Mardis, Elaine R. ;
Marth, Gabor T. ;
McVean, Gil A. ;
Nickerson, Deborah A. ;
Schmidt, Jeanette P. ;
Sherry, Stephen T. ;
Wang, Jun ;
Wilson, Richard K. ;
Gibbs, Richard A. ;
Dinh, Huyen ;
Kovar, Christie ;
Lee, Sandra ;
Lewis, Lora ;
Muzny, Donna ;
Reid, Jeff ;
Wang, Min ;
Wang, Jun ;
Fang, Xiaodong ;
Guo, Xiaosen ;
Jian, Min ;
Jiang, Hui ;
Jin, Xin ;
Li, Guoqing ;
Li, Jingxiang ;
Li, Yingrui ;
Li, Zhuo ;
Liu, Xiao ;
Lu, Yao ;
Ma, Xuedi ;
Su, Zhe ;
Tai, Shuaishuai ;
Tang, Meifang .
NATURE, 2012, 491 (7422) :56-65
[3]   Allelic heterogeneity of GNE gene mutation in two Tunisian families with autosomal recessive inclusion body myopathy [J].
Amouri, R ;
Driss, A ;
Murayama, K ;
Kefi, M ;
Nishino, I ;
Hentati, F .
NEUROMUSCULAR DISORDERS, 2005, 15 (05) :361-363
[4]   Hereditary inclusion body myopathy - The Middle Eastern genetic cluster [J].
Argov, Z ;
Eisenberg, L ;
Grabov-Nardini, G ;
Sadeh, M ;
Wirguin, I ;
Soffer, D ;
Mitrani-Rosenbaum, S .
NEUROLOGY, 2003, 60 (09) :1519-1523
[5]   RIMMED VACUOLE MYOPATHY SPARING THE QUADRICEPS - A UNIQUE DISORDER IN IRANIAN JEWS [J].
ARGOV, Z ;
YAROM, R .
JOURNAL OF THE NEUROLOGICAL SCIENCES, 1984, 64 (01) :33-43
[6]  
Argov Zohar, 1998, Current Opinion in Rheumatology, V10, P543, DOI 10.1097/00002281-199811000-00006
[7]  
Askanas Valerie, 1995, Current Opinion in Rheumatology, V7, P486, DOI 10.1097/00002281-199511000-00005
[8]   Distal myopathy due to mutations of GNE gene:: Clinical spectrum and diagnosis [J].
Behin, A. ;
Dubourg, O. ;
Laforet, P. ;
Pecheux, C. ;
Bernard, R. ;
Levy, N. ;
Eymard, B. .
REVUE NEUROLOGIQUE, 2008, 164 (05) :434-443
[9]   Domain-specific characteristics of the bifunctional key enzyme of sialic acid biosynthesis, UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase [J].
Blume, A ;
Weidemann, W ;
Stelzl, U ;
Wanker, EE ;
Lucka, L ;
Donner, P ;
Reutter, W ;
Horstkorte, D ;
Hinderlich, S .
BIOCHEMICAL JOURNAL, 2004, 384 :599-607
[10]   Molecular diagnosis of hereditary inclusion body myopathy by linkage analysis and identification of a novel splice site mutation in GNE [J].
Boyden, Steven E. ;
Duncan, Anna R. ;
Estrella, Elicia A. ;
Lidov, Hart G. W. ;
Mahoney, Lane J. ;
Katz, Jonathan S. ;
Kunkel, Louis M. ;
Kang, Peter B. .
BMC MEDICAL GENETICS, 2011, 12