Pharmacogenomics and Pharmacogenetics: In Silico Prediction of Drug Effects in Treatments for Novel Coronavirus SARS-CoV2 Disease

被引:12
|
作者
Cafiero, Concetta [1 ]
Re, Agnese [2 ]
Micera, Alessandra [3 ]
Palmirotta, Raffaele [4 ]
Monaco, Delio [5 ]
Romano, Francesca [6 ]
Fabrizio, Claudia [7 ]
Di Francia, Raffaele [8 ]
Cacciamani, Andrea [3 ]
Surico, Pier Luigi [9 ]
D'Amato, Gerardo [10 ]
Pisconti, Salvatore [1 ]
机构
[1] SG Moscati Hosp, Med Oncol, Taranto, Italy
[2] Univ Cattolica Sacro Cuore, CNR IASI, Rome, Italy
[3] IRCCS Fdn Bietti, Res Labs Ophthalmol, 6 Via Santo Stefano Rotondo, I-00184 Rome, Italy
[4] Aldo Moro Univ Bari, Oncogen Res Ctr, Dept Biomed Sci & Clin Oncol, Bari, Italy
[5] SG Moscati Hosp, Radiol, Taranto, Italy
[6] Luigi Vanvitelli Univ Campania, Dept Precis Med, Naples, Italy
[7] SG Moscati Hosp, Infect Dis Unit, Taranto, Italy
[8] Italian Assoc Pharmacogen & Mol Diagnost, Ancona, Italy
[9] F Miulli Hosp, Oncol & Hematol Dept, Acquaviva Delle Fonti, Italy
[10] A Gemelli Polyclin Fdn, Endocrine & Metab Surg, Rome, Italy
关键词
Covid-19; SARS-CoV2; drug effects; pharmacogenomics; pharmacogenetics; in silico; ADR; ACUTE LYMPHOBLASTIC-LEUKEMIA; RESPIRATORY SYNDROME; ATAZANAVIR PHARMACOKINETICS; ANTIRETROVIRAL REGIMENS; MULTIPLE-SCLEROSIS; CYTOKINE STORM; 2019; COVID-19; THERAPY; HYDROXYCHLOROQUINE; ASSOCIATION;
D O I
10.2147/PGPM.S270069
中图分类号
R9 [药学];
学科分类号
1007 ;
摘要
The latest developments in precision medicine allow the modulation of therapeutic approaches in different pathologies on the basis of the specific molecular characterization of the patient. This review of the literature coupled with in silico analysis was to provide a selected screening of interactions between single-nucleotide polymorphisms (SNPs) and drugs (repurposed, investigational, and biological agents) showing efficacy and toxicityin counteracting Covid-19 infection. In silico analysis of genetic variants related to each drug was performed on such databases as PharmGKB, Ensembl Genome Browser, www.drugs.com, and SNPedia, with an extensive literature review of papers (to May 10, 2020) on Covid-19 treatments using Medline, Embase, International Pharmaceutical Abstracts, PharmGKB, and Google Scholar. The clinical relevance of SNPs, known as both drug targets and markers, considering genetic variations with known drug responses, and the therapeutic consequences are discussed. In the context of clinical treatment of Covid-19, including infection prevention, control measures, and supportive care, this review highlights the importance of a personalized approach in the final selection of therapy, which is probably essential in the management of the Covid-19 pandemic.
引用
收藏
页码:463 / 484
页数:22
相关论文
共 50 条
  • [1] In silico Study of Pharmacological Treatments against SARS-CoV2 Main Protease
    Kadil, Youness
    Mouhcine, Mohamed
    Filali, Houda
    JOURNAL OF PURE AND APPLIED MICROBIOLOGY, 2020, 14 : 1065 - 1071
  • [2] Novel β-Coronavirus (SARS-CoV-2): Current and future aspects of pharmacological treatments
    Tiwari, Nidhi
    Upadhyay, Jyoti
    Ansari, Mohd Nazam
    Joshi, Rohit
    SAUDI PHARMACEUTICAL JOURNAL, 2020, 28 (10) : 1243 - 1252
  • [3] A literature review of 2019 novel coronavirus (SARS-CoV2) infection in neonates and children
    Di Nardo, Matteo
    van Leeuwen, Grace
    Loreti, Alessandra
    Barbieri, Maria Antonietta
    Guner, Yit
    Locatelli, Franco
    Ranieri, Vito Marco
    PEDIATRIC RESEARCH, 2021, 89 (05) : 1101 - 1108
  • [4] Mortality Rates of Coronavirus Disease 2019 (COVID-19) Caused by the Novel Severe Acute Respiratory Syndrome Coronavirus-2 (SARS-CoV2)
    Kandi, Venkataramana
    Thungaturthi, Sudhakar
    Vadakedath, Sabitha
    Gundu, Rajkumar
    Mohapatra, Ranjan K.
    CUREUS JOURNAL OF MEDICAL SCIENCE, 2021, 13 (03)
  • [5] Polypharmacology guided drug repositioning approach for SARS-CoV2
    Jamir, Esther
    Sarma, Himakshi
    Priyadarsinee, Lipsa
    Kiewhuo, Kikrusenuo
    Nagamani, Selvaraman
    Sastry, G. Narahari
    PLOS ONE, 2023, 18 (08):
  • [6] Applying polypharmacology approach for drug repurposing for SARS-CoV2
    Jamir, Esther
    Sarma, Himakshi
    Priyadarsinee, Lipsa
    Nagamani, Selvaraman
    Kiewhuo, Kikrusenuo
    Gaur, Anamika Singh
    Rawal, Ravindra K.
    Murugan, Natarajan Arul
    Subramanian, Venkatesan
    Sastry, G. Narahari
    JOURNAL OF CHEMICAL SCIENCES, 2022, 134 (02)
  • [7] An in-silico approach to study the possible interactions of miRNA between human and SARS-CoV2
    Sarma, Abhijit
    Phukan, Homen
    Halder, Neha
    Madanan, Madathiparambil Gopalakrishnan
    COMPUTATIONAL BIOLOGY AND CHEMISTRY, 2020, 88 (88)
  • [8] The Progression of SARS Coronavirus 2 (SARS-CoV2): Mutation in the Receptor Binding Domain of Spike Gene
    Kim, Sinae
    Lee, Jong Ho
    Lee, Siyoung
    Shim, Saerok
    Nguyen, Tam T.
    Hwang, Jihyeong
    Kim, Heijun
    Choi, Yeo-Ok
    Hong, Jaewoo
    Bae, Suyoung
    Jhun, Hyunjhung
    Yum, Hokee
    Lee, Youngmin
    Chan, Edward D.
    Yu, Liping
    Azam, Tania
    Kim, Yong-Dae
    Yeom, Su Cheong
    Ha Yoo, Kwang
    Kang, Lin-Woo
    Shin, Kyeong-Cheol
    Kim, Soohyun
    IMMUNE NETWORK, 2020, 20 (05) : 1 - 11
  • [9] THE IMPACT OF CORONAVIRUS (SARS-COV2) EPIDEMIC ON INDIVIDUALS MENTAL HEALTH: THE PROTECTIVE MEASURES OF PAKISTAN IN MANAGING AND SUSTAINING TRANSMISSIBLE DISEASE
    Abbas, Jaffar
    PSYCHIATRIA DANUBINA, 2020, 32 (3-4) : 472 - 477
  • [10] Pharmacogenomics of genetic polymorphism within the genes responsible for SARS-CoV-2 susceptibility and the drug-metabolising genes used in treatment
    AL-Eitan, Laith N.
    Alahmad, Saif Z.
    REVIEWS IN MEDICAL VIROLOGY, 2021, 31 (04)