Down-regulation and clinical significance of miR-7-2-3p in papillary thyroid carcinoma with multiple detecting methods

被引:8
作者
Wu, Hua-yu [1 ,2 ]
Wei, Yi [1 ]
Pan, Shang-ling [1 ]
机构
[1] Guangxi Med Univ, Sch Preclin Med, Dept Pathophysiol, Nanning 530021, Guangxi Zhuang, Peoples R China
[2] Guangxi Med Univ, Sch Preclin Med, Dept Cell Biol & Genet, Nanning 530021, Guangxi Zhuang, Peoples R China
基金
中国国家自然科学基金;
关键词
bioinformatics; genomics; biological tissues; tumours; cancer; genetics; proteins; biochemistry; RNA; molecular biophysics; cellular biophysics; miR-7-2-3p; papillary thyroid carcinoma tissues; function enrichment analysis; MiR-7-2-3p; altered miRNA expression participates; functions; authors examined expression levels; GSE62054; GSE73182; GSE40807; GSE55780; EPITHELIAL-MESENCHYMAL TRANSITION; INTEGRIN ALPHA-V; TUMOR-SUPPRESSOR; CELL-PROLIFERATION; COLORECTAL-CANCER; MICRORNA; MIRNA; RISK; DIFFERENTIATION; OVEREXPRESSION;
D O I
10.1049/iet-syb.2019.0025
中图分类号
Q2 [细胞生物学];
学科分类号
071009 ; 090102 ;
摘要
Altered miRNA expression participates in the biological progress of thyroid carcinoma and functions as a diagnostic marker or therapeutic agent. However, the role of miR-7-2-3p is currently unclear. The authors' study was the first investigation of miR-7-2-3p expression level and diagnostic ability in several public databases. Potential target genes were obtained from DIANA Tools, and function enrichment analysis was then performed. Furthermore, the authors examined expression levels of potential targets in the Human Protein Atlas (HPA) and the Cancer Genome Atlas (TCGA). Finally, the potential transcription factors (TFs) were predicted by JASPAR. TCGA, GSE62054, GSE73182, GSE40807, and GSE55780 revealed that miR-7-2-3p expression in papillary thyroid carcinoma (PTC) tissues was notably lower compared with non-tumour tissues, while its expression in E-MATB-736 showed no remarkable difference. Function enrichment analysis showed that 698 genes were enriched in pathways, including pathways in cancer, and glioma. CCND1, GSK3B, and ITGAV of pathways in cancer were inverse correlations with miR-7-2-3p in both post-transcription and protein levels. According to the TF prediction, the prospective upstream TFs of miR-7-2-3p were ISX, SPI1, PRRX1, and BARX1. MiR-7-2-3p was significantly down-regulated and may act on PTC progression by crucial pathways. However, the mechanisms of miR-7-2-3p need further investigation.
引用
收藏
页码:225 / 233
页数:9
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