Oligonucleotide microarrays in microbial diagnostics

被引：181

作者：

Bodrossy, L ^{[1
]}

Sessitsch, A ^{[1
]}

机构：

[1] ARC Seibersdorf Res GmbH, Dept Bioresources Microbiol, A-2444 Seibersdorf, Austria

来源：

CURRENT OPINION IN MICROBIOLOGY | 2004年 / 7卷 / 03期

基金：

奥地利科学基金会;

关键词：

D O I：

10.1016/j.mib.2004.04.005

中图分类号：

Q93 [微生物学];

学科分类号：

071005 ; 100705 ;

摘要：

Oligonucleotide microarrays offer a fast, high-throughput alternative for the parallel detection of microbes from virtually any sample. The application potential spreads across most sectors of life sciences, including environmental microbiology and microbial ecology; human, veterinary, food and plant diagnostics; water quality control; industrial microbiology, and so on. The past two years have witnessed a rapid increase of research in this field. Many alternative techniques were developed and validated as seen in 'proof-of-concept' articles. Publications reporting on the application of oligonucleotide microarray technology for microbial diagnostics in microbiology driven projects have just started to appear. Current and future technical and bioinformatics developments will inevitably improve the potential of this technology further.

引用

页码：245 / 254

页数：10

共 66 条

[31] Multiple label-free biodetection and quantitative DNA-binding assays on a nanomechanical cantilever array [J].

McKendry, R ;

Zhang, JY ;

Arntz, Y ;

Strunz, T ;

Hegner, M ;

Lang, HP ;

Baller, MK ;

Certa, U ;

Meyer, E ;

Güntherodt, HJ ;

Gerber, C .

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2002, 99 (15) :9783-9788

[32]

Microarrays, 2003, BEGINNERS GUIDE MICR, P43

[33] Identification of rifampin-resistant Mycobacterium tuberculosis strains by hybridization, PCR, and ligase detection reaction on oligonucleotide microchips [J].

Mikhailovich, V ;

Lapa, S ;

Gryadunov, D ;

Sobolev, A ;

Strizhkov, B ;

Chernyh, N ;

Skotnikova, O ;

Irtuganova, O ;

Moroz, A ;

Litvinov, V ;

Vladimirskii, M ;

Perelman, M ;

Chernousova, L ;

Erokhin, V ;

Zasedatelev, A ;

Mirzabekov, A .

JOURNAL OF CLINICAL MICROBIOLOGY, 2001, 39 (07) :2531-2540

[34] Microarray-based identification of bacteria in clinical samples by solid-phase PCR amplification of 23S ribosomal DNA sequences [J].

Mitterer, G ;

Huber, M ;

Leidinger, E ;

Kirisits, C ;

Lubitz, W ;

Mueller, MW ;

Schmidt, WM .

JOURNAL OF CLINICAL MICROBIOLOGY, 2004, 42 (03) :1048-1057

[35] Label-free detection of 16S ribosomal RNA hybridization on reusable DNA arrays using surface plasmon resonance imaging [J].

Nelson, BP ;

Liles, MR ;

Frederick, KB ;

Corn, RM ;

Goodman, RM .

ENVIRONMENTAL MICROBIOLOGY, 2002, 4 (11) :735-743

[36] Optimization strategies for DNA microarray-based detection of bacteria with 16S rRNA-targeting oligonucleotide probes [J].

Peplies, J ;

Glöckner, FO ;

Amann, R .

APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2003, 69 (03) :1397-1407

[37]

PEPLIES J, 2004, IN PRESS ENV MICROBI

[38] LNA: a versatile tool for therapeutics and genomics [J].

Petersen, M ;

Wengel, J .

TRENDS IN BIOTECHNOLOGY, 2003, 21 (02) :74-81

[39] A(r)ray of hope in analysis diversity of microbial of the function and communities [J].

Polz, MF ;

Bertilsson, S ;

Acinas, SG ;

Hunt, D .

BIOLOGICAL BULLETIN, 2003, 204 (02) :196-199

[40] Stable-isotope probing as a tool in microbial ecology [J].

Radajewski, S ;

Ineson, P ;

Parekh, NR ;

Murrell, JC .

NATURE, 2000, 403 (6770) :646-649

← 1 2 3 4 5 6 7 →