Development of microsatellite markers from loquat, Eriobotrya japonica (Thunb.) Lindl.

被引:14
作者
Gisbert, A. D. [1 ]
Lopez-Capuz, I. [1 ]
Soriano, J. M. [1 ]
Llacer, G. [1 ]
Romero, C. [1 ]
Badenes, M. L. [1 ]
机构
[1] Inst Valenciano Invest Agr, Valencia 46113, Spain
关键词
enriched library; germplasm collection; loquat; SSRs;
D O I
10.1111/j.1755-0998.2008.02211.x
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Loquat (Eriobotrya japonica) is a minor fruit which has become an interesting alternative into the European fruit industry. This interest resulted in a loquat germplasm collection established at the Instituto Valenciano de Investigaciones Agrarias, Valencia, Spain. Currently, it is the main reservoir of this species outside Asia. We developed and characterized the first 21 polymorphic microsatellite loci from a CT/AG-enriched loquat genomic library. The observed heterozygosity ranged between 0.20 and 1.00, expected heterozygosity ranged between 0.17 and 0.81, three markers were multilocus and eight loci departed significantly from Hardy-Weinberg equilibrium. These markers will facilitate diversity and genetic studies into the species.
引用
收藏
页码:803 / 805
页数:3
相关论文
共 11 条
  • [1] Development and variability analysis of microsatellite markers in peach
    Aranzana, MJ
    Garcia-Mas, J
    Carbó, J
    Arús, P
    [J]. PLANT BREEDING, 2002, 121 (01) : 87 - 92
  • [2] Analysis of a germplasm collection of loquat (Eriobotrya japonica Lindl.)
    Badenes, ML
    Martínez-Calvo, J
    Llácer, G
    [J]. EUPHYTICA, 2000, 114 (03) : 187 - 194
  • [3] Characterization of under-utilized fruits by molecular markers.: A case study of loquat
    Badenes, ML
    Canyámas, T
    Romero, C
    Mártinez-Calvo, J
    Giordani, E
    Llácer, G
    [J]. GENETIC RESOURCES AND CROP EVOLUTION, 2004, 51 (03) : 335 - 341
  • [4] BADENES ML, 2006, CULTIVO NISPERO JAPO, P305
  • [5] Lin ShunQuan Lin ShunQuan, 1999, Horticultural Reviews, V23, P233, DOI 10.1002/9780470650752.ch5
  • [6] LLACER G, 2004, OPTIONS MEDITERRANEE, V58, P45
  • [7] Martinez-Calvo J, 2006, MONOGRAFIAS INIA A, V21, P73
  • [8] GENEPOP (VERSION-1.2) - POPULATION-GENETICS SOFTWARE FOR EXACT TESTS AND ECUMENICISM
    RAYMOND, M
    ROUSSET, F
    [J]. JOURNAL OF HEREDITY, 1995, 86 (03) : 248 - 249
  • [9] Genetic diversity of loquat germplasm (Eriobotrya japonica (Thunb) Lindl) assessed by SSR markers
    Soriano, JM
    Romero, C
    Vilanova, S
    Llácer, G
    Badenes, ML
    [J]. GENOME, 2005, 48 (01) : 108 - 114
  • [10] MICRO-CHECKER: software for identifying and correcting genotyping errors in microsatellite data
    Van Oosterhout, C
    Hutchinson, WF
    Wills, DPM
    Shipley, P
    [J]. MOLECULAR ECOLOGY NOTES, 2004, 4 (03): : 535 - 538