Identification of internal reference genes for porcine immature Sertoli cells under heat stress

被引:6
作者
Wang, Yi [1 ]
Wu, Zi-Wei [1 ]
Fang, Ting [1 ]
Zhang, Yu-Qing [1 ]
Chen, Lu [2 ]
Du, Zhi-Qiang [1 ]
Yang, Cai-Xia [1 ]
机构
[1] Yangtze Univ, Coll Anim Sci, Jingzhou 434025, Hubei, Peoples R China
[2] Northeast Agr Univ, Coll Anim Sci & Technol, Harbin, Heilongjiang, Peoples R China
关键词
heat stress; immature Sertoli cell; pig; reference gene; RT-qPCR; HOUSEKEEPING GENES; PCR DATA; NORMALIZATION; PIG; QUANTIFICATION; EXPRESSION; SELECTION; MODEL;
D O I
10.1111/rda.14211
中图分类号
S8 [畜牧、 动物医学、狩猎、蚕、蜂];
学科分类号
0905 ;
摘要
Identification of stably expressed gene(s) as internal reference(s) for different experimental conditions is key to the accurate normalization and quantification of target transcripts. Previously, our RNA-seq study showed that Hprt1, Actb, and 18S rRNA abundances were all significantly altered in porcine immature Sertoli cells (iSCs) during acute heat stress (HS). In the current study, we aimed to identify stable reference gene(s) to study the gene expression dynamics of quick and delayed responses after acute HS treatment of porcine iSCs. A total of six genes previously used in pig testis or Sertoli cells (Hprt1, Top2b, Actb, Rpl32, Gapdh, and 18S rRNA) were chosen to perform RT-qPCR for the control (before acute HS), HS0.5 (acute HS at 43 degrees C for 0.5 h), and HS0.5-R36 (36 h recovery following acute HS) groups. The stability of candidate reference genes was examined by the GeNorm, NormFinder, BestKeeper and Comparative Delta Ct methods, and RefFinder to obtain the final rank. Rpl32 and Actb were the two most stable internal reference genes as found by all methods, whereas Hprt1 and 18S rRNA were the two most unstable as ranked by RefFinder. Moreover, expression of six target mRNAs (Ccn1, Ccnb1, Eif4g1, Hdac6, Plk2, and Ptma) was normalized using Rpl32, Actb, or the combination of Rpl32 and Actb, respectively. Therefore, our findings that the most suitable internal references are Rpl32 and Actb provide useful information for further functional investigation on genes regulating the acute HS of porcine iSCs.
引用
收藏
页码:1344 / 1352
页数:9
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