Alterations in Intestinal Microbiota of Children With Celiac Disease at the Time of Diagnosis and on a Gluten-free Diet

被引:50
作者
Zafeiropoulou, Konstantina [1 ]
Nichols, Ben [1 ]
Mackinder, Mary [1 ]
Biskou, Olga [1 ]
Rizou, Eleni [1 ]
Karanikolou, Antonia [1 ]
Clark, Clare [1 ]
Buchanan, Elaine [2 ]
Cardigan, Tracey [2 ]
Duncan, Hazel [2 ]
Wands, David [2 ]
Russell, Julie [3 ]
Hansen, Richard [2 ]
Russell, Richard K. [2 ]
McGrogan, Paraic [2 ]
Edwards, Christine A. [1 ]
Ijaz, Umer Z. [3 ]
Gerasimidis, Konstantinos [1 ]
机构
[1] Univ Glasgow, Glasgow Royal Infirm, Coll Med Vet & Life Sci, Sch Med Dent & Nursing,Human Nutr, New Lister Bldg, Glasgow G31 2ER, Lanark, Scotland
[2] Royal Hosp Children, Dept Paediat Gastroenterol, Glasgow, Lanark, Scotland
[3] Univ Glasgow, Sch Engn, Civil Engn, Glasgow, Lanark, Scotland
基金
英国生物技术与生命科学研究理事会;
关键词
OTU; Pediatric; Microbiome; Short-chain Fatty Acids;
D O I
10.1053/j.gastro.2020.08.007
中图分类号
R57 [消化系及腹部疾病];
学科分类号
摘要
BACKGROUND AND AIMS: It is not clear whether alterations in the intestinal microbiota of children with celiac disease (CD) cause the disease or are a result of disease and/or its treatment with a gluten-free diet (GFD). METHODS: We obtained 167 fecal samples from 141 children (20 with new onset CD, 45 treated with a GFD, 57 healthy children, and 19 unaffected siblings of children with CD) in Glasgow, Scotland. Samples were analyzed by 16S ribosomal RNA sequencing, and diet-related metabolites were measured by gas chromatography. We obtained fecal samples from 13 children with new-onset CD after 6 and 12 months on a GFD. Relationships between microbiota with diet composition, gastrointestinal function, and biomarkers of GFD compliance were explored. RESULTS: Microbiota a diversity did not differ among groups. Microbial dysbiosis was not observed in children with new-onset CD. In contrast, 2.8% (Bray-Curtis dissimilarity index, P = .025) and 2.5% (UniFrac distances, P = .027) of the variation in microbiota composition could be explained by the GFD. Between 3% and 5% of all taxa differed among all group comparisons. Eleven distinctive operational taxonomic units composed a microbe signature specific to CD with high diagnostic probability. Most operational taxonomic units that differed between patients on a GFD with new-onset CD vs healthy children were associated with nutrient and food group intake (from 75% to 94%) and with biomarkers of gluten ingestion. Fecal levels of butyrate and ammonia decreased during the GFD. CONCLUSIONS: Although several alterations in the intestinal microbiota of children with established CD appear to be effects of a GFD, specific bacteria were found to be distinct biomarkers of CD. Studies are needed to determine whether these bacteria contribute to pathogenesis of CD.
引用
收藏
页码:2039 / 2051.e20
页数:33
相关论文
共 48 条
[1]   Induction of Colonic Regulatory T Cells by Indigenous Clostridium Species [J].
Atarashi, Koji ;
Tanoue, Takeshi ;
Shima, Tatsuichiro ;
Imaoka, Akemi ;
Kuwahara, Tomomi ;
Momose, Yoshika ;
Cheng, Genhong ;
Yamasaki, Sho ;
Saito, Takashi ;
Ohba, Yusuke ;
Taniguchi, Tadatsugu ;
Takeda, Kiyoshi ;
Hori, Shohei ;
Ivanov, Ivaylo I. ;
Umesaki, Yoshinori ;
Itoh, Kikuji ;
Honda, Kenya .
SCIENCE, 2011, 331 (6015) :337-341
[2]   Duodenal Bacteria From Patients With Celiac Disease and Healthy Subjects Distinctly Affect Gluten Breakdown and Immunogenicity [J].
Caminero, Alberto ;
Galipeau, Heather J. ;
McCarville, Justin L. ;
Johnston, Chad W. ;
Bernier, Steve P. ;
Russell, Amy K. ;
Jury, Jennifer ;
Herran, Alexandra R. ;
Casqueiro, Javier ;
Tye-Din, Jason A. ;
Surette, Michael G. ;
Magarvey, Nathan A. ;
Schuppan, Detlef ;
Verdu, Elena F. .
GASTROENTEROLOGY, 2016, 151 (04) :670-683
[3]   Diversity of the cultivable human gut microbiome involved in gluten metabolism: isolation of microorganisms with potential interest for coeliac disease [J].
Caminero, Alberto ;
Herran, Alexandra R. ;
Nistal, Esther ;
Perez-Andres, Jenifer ;
Vaquero, Luis ;
Vivas, Santiago ;
Ruiz de Morales, Jose Maria G. ;
Albillos, Silvia M. ;
Casqueiro, Javier .
FEMS MICROBIOLOGY ECOLOGY, 2014, 88 (02) :309-319
[4]   Imbalances in faecal and duodenal Bifidobacterium species composition in active and non-active coeliac disease [J].
Carmen Collado, Maria ;
Donat, Ester ;
Ribes-Koninckx, Carmen ;
Calabuig, Miguel ;
Sanz, Yolanda .
BMC MICROBIOLOGY, 2008, 8 (1)
[5]   Duodenal microbiota composition and mucosal homeostasis in pediatric celiac disease [J].
Cheng, Jing ;
Kalliomaki, Marko ;
Heilig, Hans G. H. J. ;
Palva, Airi ;
Lahteenoja, Hannu ;
de Vos, Willem M. ;
Salojarvi, Jarkko ;
Satokari, Reetta .
BMC GASTROENTEROLOGY, 2013, 13
[6]   Specific duodenal and faecal bacterial groups associated with paediatric coeliac disease [J].
Collado, M. C. ;
Donat, E. ;
Ribes-Koninckx, C. ;
Calabuig, M. ;
Sanz, Y. .
JOURNAL OF CLINICAL PATHOLOGY, 2009, 62 (03) :264-269
[7]  
Collado Maria Carmen, 2007, Curr Issues Intest Microbiol, V8, P9
[8]   Metagenomics Reveals Dysbiosis and a Potentially Pathogenic N-flavescens Strain in Duodenum of Adult Celiac Patients [J].
D'Argenio, Valeria ;
Casaburi, Giorgio ;
Precone, Vincenza ;
Pagliuca, Chiara ;
Colicchio, Roberta ;
Sarnataro, Daniela ;
Discepolo, Valentina ;
Kim, Sangman M. ;
Russo, Ilaria ;
Blanco, Giovanna Del Vecchio ;
Horner, David S. ;
Chiara, Matteo ;
Pesole, Graziano ;
Salvatore, Paola ;
Monteleone, Giovanni ;
Ciacci, Carolina ;
Caporaso, Gregory J. ;
Jabri, Bana ;
Salvatore, Francesco ;
Sacchetti, Lucia .
AMERICAN JOURNAL OF GASTROENTEROLOGY, 2016, 111 (06) :879-890
[9]   Inter-individual differences determine the outcome of wheat bran colonization by the human gut microbiome [J].
De Paepe, Kim ;
Kerckhof, Frederiek-Maarten ;
Verspreet, Joran ;
Courtin, Christophe M. ;
Van de Wiele, Tom .
ENVIRONMENTAL MICROBIOLOGY, 2017, 19 (08) :3251-3267
[10]   Intestinal dysbiosis and reduced immunoglobulin-coated bacteria associated with coeliac disease in children [J].
De Palma, Giada ;
Nadal, Inmaculada ;
Medina, Marcela ;
Donat, Ester ;
Ribes-Koninckx, Carmen ;
Calabuig, Miguel ;
Sanz, Yolanda .
BMC MICROBIOLOGY, 2010, 10