Draft Genome Sequence of a Novel Methylobacterium brachiatum Strain Isolated from Human Skin

被引:0
作者
Cremers, Geert [1 ]
Kenyon, Angelique [1 ]
Gubbels, Niels [1 ]
Jansen, Matthijs [1 ]
van Alen, Theo A. [1 ]
Berben, Tom [1 ]
Op den Camp, Huub J. M. [1 ]
机构
[1] Radboud Univ Nijmegen, Dept Microbiol, IWWR, Nijmegen, Netherlands
来源
MICROBIOLOGY RESOURCE ANNOUNCEMENTS | 2020年 / 9卷 / 50期
基金
欧洲研究理事会;
关键词
METHYLOTROPHIC BACTERIA; MOLECULAR-DETECTION; SP-NOV;
D O I
10.1128/MRA.01093-20
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Methylobacterium brachiatum MBRA is an aerobic alphaproteobacterium isolated from the human skin on methanol-containing minimal medium. The genome was sequenced using Illumina and Nanopore technology, and the genome was assembled using Unicycler. M. brachiatum MBRA possesses two xoxF genes, one gene pair, mxaF and mxaI, and a complete serine pathway.
引用
收藏
页数:3
相关论文
共 15 条
[1]   Isolation and molecular detection of methylotrophic bacteria occurring in the human mouth [J].
Anesti, V ;
McDonald, IR ;
Ramaswamy, M ;
Wade, WG ;
Kelly, DP ;
Wood, AP .
ENVIRONMENTAL MICROBIOLOGY, 2005, 7 (08) :1227-1238
[2]   Molecular detection and isolation of facultatively methylotrophic bacteria, including Methylobacterium podarium sp nov., from the human foot microflora [J].
Anesti, V ;
Vohra, J ;
Goonetilleka, S ;
McDonald, IR ;
Sträubler, B ;
Stackebrandt, E ;
Kelly, DP ;
Wood, AP .
ENVIRONMENTAL MICROBIOLOGY, 2004, 6 (08) :820-830
[3]  
CARVAJAL TM, 2011, PHILIPP J SYST BIOL, V5, P1
[4]   Lanmodulin: A Highly Selective Lanthanide-Binding Protein from a Lanthanide-Utilizing Bacterium [J].
Cotruvo, Joseph A., Jr. ;
Featherston, Emily R. ;
Mattocks, Joseph A. ;
Ho, Jackson V. ;
Laremore, Tatiana N. .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2018, 140 (44) :15056-15061
[5]   METABOLIC METHANOL: MOLECULAR PATHWAYS AND PHYSIOLOGICAL ROLES [J].
Dorokhov, Yuri L. ;
Shindyapina, Anastasia V. ;
Sheshukova, Ekaterina V. ;
Komarova, Tatiana V. .
PHYSIOLOGICAL REVIEWS, 2015, 95 (02) :603-644
[6]   Methylobacterium persicinum sp nov., Methylobacterium komagatae sp nov., Methylobacterium brachiatum sp nov., Methylobacterium tardum sp nov and Methylobacterium gregans sp nov., isolated from freshwater [J].
Kato, Yuko ;
Asahara, Mika ;
Goto, Keiichi ;
Kasai, Hiroaki ;
Yokota, Akira .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2008, 58 :1134-1141
[7]   PQQ-dependent methanol dehydrogenases: rare-earth elements make a difference [J].
Keltjens, Jan T. ;
Pol, Arjan ;
Reimann, Joachim ;
Op den Camp, Huub J. M. .
APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, 2014, 98 (14) :6163-6183
[8]   Methylotrophic bacteria in sustainable agriculture [J].
Kumar, Manish ;
Tomar, Rajesh Singh ;
Lade, Harshad ;
Paul, Diby .
WORLD JOURNAL OF MICROBIOLOGY & BIOTECHNOLOGY, 2016, 32 (07)
[9]  
Nurk Sergey, 2013, Research in Computational Molecular Biology. 17th Annual International Conference (RECOMB 2013). Proceedings, P158, DOI 10.1007/978-3-642-37195-0_13
[10]   CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes [J].
Parks, Donovan H. ;
Imelfort, Michael ;
Skennerton, Connor T. ;
Hugenholtz, Philip ;
Tyson, Gene W. .
GENOME RESEARCH, 2015, 25 (07) :1043-1055