Characterization of the complete chloroplast genome of Phleum pratense L. cv. Minshan

被引:2
作者
Cui, Guangxin [1 ]
Lu, Yuan [1 ]
Wei, Xiaoxing [2 ]
Wang, Xiaoli [1 ]
Wang, Chunmei [1 ]
Gao, Yaqin [3 ]
Duan, Huirong [1 ]
机构
[1] Chinese Acad Agr Sci, Lanzhou Inst Husb & Pharmaceut Sci, Lanzhou 730050, Gansu, Peoples R China
[2] Qinghai Univ, Acad Anim & Vet Sci, Xining, Qinghai, Peoples R China
[3] Chinese Acad Agr Sci, Lanzhou Inst Husb & Pharmaceut Sci, Lab Qual & Safety Risk Assessment Livestock Prod, Minist Agr & Rural Affairs, Lanzhou 730050, Gansu, Peoples R China
来源
MITOCHONDRIAL DNA PART B-RESOURCES | 2019年 / 4卷 / 02期
关键词
Phleum pratense L; cv; Minshan; chloroplast genome; phylogenetic relationship;
D O I
10.1080/23802359.2019.1692706
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Severe seed degradation of Phleum pratense L. cv. Minshan restricts its productivity and promotion, the chloroplast genome and evolutionary relationship analysis of Minshan could provide inheritance reasons on seed degradation and fundamental genetic reference for its molecular breeding and biological research. Its chloroplast genome was 134,973 bp in length, containing a pair of inverted repeated regions (42,726 bp) which were separated by a large single copy region of 79,473 bp, and a small single copy region of 12,774 bp. Moreover, a total of 114 functional genes were annotated, including 79 mRNA, 32 tRNA genes, and 5 rRNA genes. The phylogenetic relationships of 25 species indicated that Minshan was closely related to Avena damascene.
引用
收藏
页码:4180 / 4181
页数:2
相关论文
共 5 条
[1]  
[曹致中 Cao Zhizhong], 2003, [中国草地, Grassland of China], V25, P72
[2]  
Du WH, 2003, GRASSLAND TURF, V4, P7
[3]   MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability [J].
Katoh, Kazutaka ;
Standley, Daron M. .
MOLECULAR BIOLOGY AND EVOLUTION, 2013, 30 (04) :772-780
[4]   GeSeq - versatile and accurate annotation of organelle genomes [J].
Tillich, Michael ;
Lehwark, Pascal ;
Pellizzer, Tommaso ;
Ulbricht-Jones, Elena S. ;
Fischer, Axel ;
Bock, Ralph ;
Greiner, Stephan .
NUCLEIC ACIDS RESEARCH, 2017, 45 (W1) :W6-W11
[5]  
[王红霞 Wang Hongxia], 2018, [草业科学, Pratacultural Science], V35, P1811