Shallow Genetic Structure of Pholis fangi in Bohai Sea and Yellow Sea Inferred from mtDNA Control Region

被引：4

作者：

Gao Tianxiang ^{[1
,2
]}

Li Lin ^{[3
]}

Fang Rundong ^{[4
]}

Liu Guanghui ^{[5
]}

Wang Lei ^{[5
]}

Xu Hanxiang ^{[1
,2
]}

Song Na ^{[4
]}

机构：

[1] Zhejiang Ocean Univ, Fishery Coll, Zhoushan 316022, Peoples R China

[2] Key Lab Technol Res Sustainable Utilizat Marine F, Zhoushan 316022, Peoples R China

[3] Qingdao Agr Univ, Marine Sci & Engn Coll, Qingdao 266109, Shandong, Peoples R China

[4] Ocean Univ China, Key Lab Mariculture, Minist Educ, Qingdao 266003, Shandong, Peoples R China

[5] Oceans & Fisheries Bur Dongying Dist, Dongying 257091, Peoples R China

来源：

JOURNAL OF OCEAN UNIVERSITY OF CHINA | 2019年 / 18卷 / 04期

基金：

中国国家自然科学基金;

关键词：

Pholis fangi; control region of mtDNA; genetic diversity; genetic structure; demographic history; POPULATION-GROWTH; DISPERSAL; DIVERSITY; VARIANCE; LESSONS; HISTORY;

D O I：

10.1007/s11802-019-3991-6

中图分类号：

P7 [海洋学];

学科分类号：

0707 ;

摘要：

Pholis fangi is an ecologically important fish species inhabiting Chinese coastal waters of Yellow Sea and Bohai Sea. To investigate the genetic diversity and population genetic structure of P. fangi, a fragment of 487 bp in the first hypervariable region (HVR-1) of the mitochondrial DNA (mtDNA) control region was sequenced for 181 individuals collected from Bohai Sea and Yellow Sea. A total of 18 polymorphic sites were detected, which defined 25 haplotypes. A moderate level of haplotype diversity (h = 0.7052) and a low level of nucleotide diversity (pi = 0.0028) were detected. Both the phylogenetic tree and the haplotype network showed no significant genealogical structure difference among sampling locations. Pairwise F-ST comparison and hierarchical molecular variance analysis (AMOVA) revealed that no significant genetic structure difference existed throughout the investigated regions, suggesting a high gene exchange among different populations. The results of neutrality test and mismatch distribution analysis indicated that a late Pleistocene population expansion (38000-127000 years ago) happened. Seasonal schooling migration may contribute to the genetically homogeneous population structure of the species.

引用

页码：947 / 952

页数：6

共 36 条

[31]

ROGERS AR, 1992, MOL BIOL EVOL, V9, P552

[32] Is the Kuroshio Current a strong barrier for the dispersal of the gizzard shad (Konosirus punctatus) in the East China Sea? [J].

Song, Na ;

Gao, Tianxiang ;

Ying, Yiping ;

Yanagimoto, Takashi ;

Han, Zhiqiang .

MARINE AND FRESHWATER RESEARCH, 2017, 68 (05) :810-820

[33]

TAJIMA F, 1989, GENETICS, V123, P585

[34] MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods [J].

Tamura, Koichiro ;

Peterson, Daniel ;

Peterson, Nicholas ;

Stecher, Glen ;

Nei, Masatoshi ;

Kumar, Sudhir .

MOLECULAR BIOLOGY AND EVOLUTION, 2011, 28 (10) :2731-2739

[35] Genetic variation among interconnected populations of Catostomus occidentalis:: implications for distinguishing impacts of contaminants from biogeographical structuring [J].

Whitehead, A ;

Anderson, SL ;

Kuivila, KM ;

Roach, JL ;

May, B .

MOLECULAR ECOLOGY, 2003, 12 (10) :2817-2833

[36] Phylogeography and population structure of - grypotus (Richardson, 1846) as revealed by mitochondrial control region sequences [J].

Zhao, Linlin ;

Yi, Dan ;

Li, Chunhou ;

Sun, Dianrong ;

Xu, Hanxiang ;

Gao, Tianxiang .

ZOOKEYS, 2017, (705) :143-158

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