Complete mitochondrial genome of Aphis gossypii Glover (Hemiptera: Aphididae)

被引:38
作者
Zhang, Shuai [1 ]
Luo, Junyu [1 ]
Wang, Chunyi [1 ]
Lv, Limin [1 ]
Li, Chunhua [1 ]
Jiang, Weili [1 ]
Cui, Jinjie [1 ]
Rajput, Lubna Bashir [1 ]
机构
[1] Chinese Acad Agr Sci, Inst Cotton Res, State Key Lab Cotton Biol, Anyang 455000, Henan, Peoples R China
基金
中国国家自然科学基金;
关键词
Aphis gossypii; Aphididae; Hemiptera; mitochondrial genome; TRANSFER-RNA GENES; PROGRAM;
D O I
10.3109/19401736.2014.919474
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
The complete mitochondrial genome of the cotton-melon aphid, Aphis gossypii Glover, was sequenced using a combination of high-throughput sequencing, traditional PCR amplification, and Sanger sequencing. The genome is 15,869bp in length, and contains 37 typical coding genes, one non-coding AT-rich region, and a repeat region found exclusively in aphids. The base composition of the genome is A (45.4%), T (38.3%), C (10.4%), and G (5.9%). All protein coding genes start with a typical ATN initiation codon; all genes use the standard termination codon (TAA) except ND4 that ends with a single TA.
引用
收藏
页码:854 / 855
页数:2
相关论文
共 7 条
[1]   Ecological specialization of the aphid Aphis gossypii Glover on cultivated host plants [J].
Carletto, J. ;
Lombaert, E. ;
Chavigny, P. ;
Brevault, T. ;
Lapchin, L. ;
Vanlerberghe-Masutti, F. .
MOLECULAR ECOLOGY, 2009, 18 (10) :2198-2212
[2]  
Ininaizumi M, 1980, SPEC B COLL AGR UTSU, V37, P1
[3]   ARWEN:: a program to detect tRNA genes in metazoan mitochondrial nucleotide sequences [J].
Laslett, Dean ;
Canback, Bjorn .
BIOINFORMATICS, 2008, 24 (02) :172-175
[4]   Ecological Adaption Analysis of the Cotton Aphid (Aphis gossypii) in Different Phenotypes by Transcriptome Comparison [J].
Li, Zhao-Qun ;
Zhang, Shuai ;
Luo, Jun-Yu ;
Wang, Chun-Yi ;
Lv, Li-Min ;
Dong, Shuang-Lin ;
Cui, Jin-Jie .
PLOS ONE, 2013, 8 (12)
[5]   tRNAscan-SE: A program for improved detection of transfer RNA genes in genomic sequence [J].
Lowe, TM ;
Eddy, SR .
NUCLEIC ACIDS RESEARCH, 1997, 25 (05) :955-964
[6]   Comparative Analysis of Mitochondrial Genomes of Five Aphid Species (Hemiptera: Aphididae) and Phylogenetic Implications [J].
Wang, Yuan ;
Huang, Xiao-Lei ;
Qiao, Ge-Xia .
PLOS ONE, 2013, 8 (10)
[7]   The complete mitochondrial genome of Gonepteryx rhamni (Lepidoptera: Pieridae: Coliadinae) [J].
Wang, Yunliang ;
Peng, Chaomin ;
Yao, Quanlin ;
Shi, Qinghui ;
Hao, Jiasheng .
MITOCHONDRIAL DNA, 2015, 26 (05) :791-792