Validation of high-resolution DNA melting analysis for mutation scanning of the LMNA gene

被引:25
|
作者
Millat, Gilles [1 ,2 ]
Chanavat, Valerie [1 ]
Julia, Sophie [4 ]
Crehalet, Herve [1 ,2 ]
Bouvagnet, Patrice [2 ,3 ,5 ]
Rousson, Robert [1 ,2 ]
机构
[1] Hosp Civils Lyon, Ctr Biol & Pathol Est, Lab Cardiogenet Mol, Bron, France
[2] Univ Lyon, F-69003 Lyon, France
[3] Univ Lyon 1, EA4171, F-69003 Lyon, France
[4] CHU Toulouse, Serv Gene Med, Hop Purpan, Toulouse, France
[5] Hosp Civils Lyon, Grp Hosp Est, Serv Cardiol C, Bron, France
关键词
Mutations; Laminopathies; Dilated cardiomyopathy; High resolution melting; DHPLC; LMNA; LAMIN A/C GENE; PERFORMANCE LIQUID-CHROMATOGRAPHY; DILATED CARDIOMYOPATHY; FUNCTIONAL CONSEQUENCES; MUSCULAR-DYSTROPHY; DISEASE; LAMINOPATHIES; PHENOTYPES; SPECTRUM;
D O I
10.1016/j.clinbiochem.2009.01.016
中图分类号
R446 [实验室诊断]; R-33 [实验医学、医学实验];
学科分类号
1001 ;
摘要
Objectives: LMNA mutations lead to a wide spectrum of disorders now called laminopathies. Due to large cohorts to investigate, mutational screening must be performed using an extremely sensitive and specific scanning method. Design and methods: High Resolution Melting (HRM) analysis was developed for LMNA mutation detection. A cohort of 64 patients with dilated cardiomyopathy was prospectively screened using both HRM and DHPLC methodologies. Results: All gene variants detected by DHPLC or by direct sequencing were also readily identified as abnormal by HRM analysis. Mutations were identified in 7 patients (similar to 11%). Complete molecular LMNA investigation was completed two times faster and cheaper than using DHPLC strategy. Conclusions: HRM analysis represents an inexpensive, highly sensitive and high-throughput method to identify LMNA genetic variants. The discovery of novel LMNA mutations will provide new insights into the pathophysiology of dilated cardiomyopathy and in all other laminopathies. (C) 2009 The Canadian Society of Clinical Chemists. Published by Elsevier Inc. All rights reserved.
引用
收藏
页码:892 / 898
页数:7
相关论文
共 50 条
  • [1] Validation of high-resolution DNA melting analysis for mutation scanning of the CDKL5 gene: Identification of novel mutations
    Raymond, Laure
    Diebold, Bertrand
    Leroux, Celine
    Maurey, Helene
    Drouin-Garraud, Valerie
    Delahaye, Andre
    Dulac, Olivier
    Metreau, Julia
    Melikishvili, Gia
    Toutain, Annick
    Rivier, Francois
    Bahi-Buisson, Nadia
    Bienvenu, Thierry
    GENE, 2013, 512 (01) : 70 - 75
  • [2] Validation of high-resolution DNA melting analysis for mutation scanning of the cystic fibrosis transmembrane conductance regulator (CFTR) gene
    Audrezet, Marie-Pierre
    Dabricot, Aurelia
    Le Marechal, Cedric
    Ferec, Claude
    JOURNAL OF MOLECULAR DIAGNOSTICS, 2008, 10 (05): : 424 - 434
  • [3] Simultaneous mutation scanning and genotyping by high-resolution DNA melting analysis
    Montgomery, Jesse
    Wittwer, Carl T.
    Palais, Robert
    Zhou, Luming
    NATURE PROTOCOLS, 2007, 2 (01) : 59 - 66
  • [4] Simultaneous mutation scanning and genotyping by high-resolution DNA melting analysis
    Jesse Montgomery
    Carl T Wittwer
    Robert Palais
    Luming Zhou
    Nature Protocols, 2007, 2 : 59 - 66
  • [5] High-resolution DNA melting analysis for simultaneous mutation scanning and genotyping in solution
    Zhou, LM
    Wang, L
    Palais, R
    Pryor, R
    Wittwer, CT
    CLINICAL CHEMISTRY, 2005, 51 (10) : 1770 - 1777
  • [6] Mutation scanning and genotyping by high-resolution DNA melting analysis in olive germplasm
    Muleo, Rosario
    Colao, Maria Chiara
    Miano, Dario
    Cirilli, Marco
    Intrieri, Maria C.
    Baldoni, Luciana
    Rugini, Eddo
    GENOME, 2009, 52 (03) : 252 - 260
  • [7] Mutation scanning using high-resolution melting
    Taylor, Claire F.
    BIOCHEMICAL SOCIETY TRANSACTIONS, 2009, 37 : 433 - 437
  • [8] High-resolution DNA melting analysis of the CFTR gene
    Montgomery, J. L.
    Wittwer, C. T.
    Zhou, L.
    JOURNAL OF MOLECULAR DIAGNOSTICS, 2007, 9 (05): : 659 - 659
  • [9] Mutation scanning of SLC25A13 gene using high-resolution melting analysis
    Lin, J. T.
    Huang, P. C.
    Chen, C. Y.
    Shiesh, S. C.
    CLINICAL CHEMISTRY, 2008, 54 (06) : A163 - A163
  • [10] Mutation scanning of the RET protooncogene using high-resolution melting analysis
    Margraf, RL
    Mao, R
    Highsmith, WE
    Holtegaard, LM
    Wittwer, CT
    CLINICAL CHEMISTRY, 2006, 52 (01) : 138 - 141