The use of DNA methylation clock in aging research

被引:18
作者
He, Xi [1 ,2 ]
Liu, Jiaojiao [1 ,2 ]
Liu, Bo [1 ,2 ]
Shi, Jingshan [1 ,2 ]
机构
[1] Zunyi Med Univ, Minist Educ, Key Lab Basic Pharmacol, Zunyi 563003, Guizhou, Peoples R China
[2] Zunyi Med Univ, Joint Int Res Lab Ethnomed, Minist Educ, Zunyi 563003, Guizhou, Peoples R China
基金
中国国家自然科学基金;
关键词
Aging; DNA methylation; epigenetic; clock; intervention; EPIGENETIC AGE ACCELERATION; ALL-CAUSE MORTALITY; BIOLOGICAL AGE; HUMAN TISSUES; CANCER-RISK; HUMAN BRAIN; LIFE-SPAN; BLOOD; PREDICTOR; ASSOCIATIONS;
D O I
10.1177/1535370220968802
中图分类号
R-3 [医学研究方法]; R3 [基础医学];
学科分类号
1001 ;
摘要
One of the key characteristics of aging is a progressive loss of physiological integrity, which weakens bodily functions and increases the risk of death. A robust biomarker is important for the assessment of biological age, the rate of aging, and a person's health status. DNA methylation clocks, novel biomarkers of aging, are composed of a group of cytosine-phosphate-guanine dinucleotides, the DNA methylation status of which can be used to accurately measure subjective age. These clocks are considered accurate biomarkers of chronological age for humans and other vertebrates. Numerous studies have demonstrated these clocks to quantify the rate of biological aging and the effects of longevity and anti-aging interventions. In this review, we describe the purpose and use of DNA methylation clocks in aging research.
引用
收藏
页码:436 / 446
页数:11
相关论文
共 129 条
[1]   DNA methylome analysis identifies accelerated epigenetic ageing associated with postmenopausal breast cancer susceptibility [J].
Ambatipudi, Srikant ;
Horvath, Steve ;
Perrier, Flavie ;
Cuenin, Cyrille ;
Hernandez-Vargas, Hector ;
Le Calvez-Kelm, Florence ;
Durand, Geoffroy ;
Byrnes, Graham ;
Ferrari, Pietro ;
Bouaoun, Liacine ;
Sklias, Athena ;
Chajes, Veronique ;
Overvad, Kim ;
Seven, Gianluca ;
Baglietto, Laura ;
Clavel-Chapelon, Francoise ;
Kaaks, Rudolf ;
Barrdahl, Myrto ;
Boeing, Heiner ;
Trichopoulou, Antonia ;
Lagiou, Pagona ;
Naska, Androniki ;
Masala, Giovanna ;
Agnoli, Claudia ;
Polidoro, Silvia ;
Tumino, Rosario ;
Panico, Salvatore ;
Dolle, Martijn ;
Peeters, Petra H. M. ;
Onland-Moret, N. Charlotte ;
Sandanger, Torkjel M. ;
Nost, Therese H. ;
Weiderpass, Elisabete ;
Quiros, J. Ramon ;
Agudo, Antonio ;
Rodriguez-Barranco, Miguel ;
Castano, Jose Maria Huerta ;
Barricarte, Aurelio ;
Fernandez, Ander Matheu ;
Travis, Ruth C. ;
Vineis, Paolo ;
Muller, David C. ;
Riboli, Elio ;
Gunter, Marc ;
Romieu, Isabelle ;
Herceg, Zdenko .
EUROPEAN JOURNAL OF CANCER, 2017, 75 :299-307
[2]   In Vivo Control of CpG and Non-CpG DNA Methylation by DNA Methyltransferases [J].
Arand, Julia ;
Spieler, David ;
Karius, Tommy ;
Branco, Miguel R. ;
Meilinger, Daniela ;
Meissner, Alexander ;
Jenuwein, Thomas ;
Xu, Guoliang ;
Leonhardt, Heinrich ;
Wolf, Verena ;
Walter, Joern .
PLOS GENETICS, 2012, 8 (06)
[3]   Early-life socioeconomic disadvantage, not current, predicts accelerated epigenetic aging of monocytes [J].
Austin, Makeda K. ;
Chen, Edith ;
Ross, Kharah M. ;
McEwen, Lisa M. ;
Maclsaac, Julia L. ;
Kobor, Michael S. ;
Miller, Gregory E. .
PSYCHONEUROENDOCRINOLOGY, 2018, 97 :131-134
[4]   Systemic Age-Associated DNA Hypermethylation of ELOVL2 Gene: In Vivo and In Vitro Evidences of a Cell Replication Process [J].
Bacalini, Maria Giulia ;
Deelen, Joris ;
Pirazzini, Chiara ;
De Cecco, Marco ;
Giuliani, Cristina ;
Lanzarini, Catia ;
Ravaioli, Francesco ;
Marasco, Elena ;
van Heemst, Diana ;
Suchiman, H. Eka D. ;
Slieker, Roderick ;
Giampieri, Enrico ;
Recchioni, Rina ;
Marcheselli, Fiorella ;
Salvioli, Stefano ;
Vitale, Giovanni ;
Olivieri, Fabiola ;
Spijkerman, Annemieke M. W. ;
Dolle, Martijn E. T. ;
Sedivy, John M. ;
Castellani, Gastone ;
Franceschi, Claudio ;
Slagboom, Pieternella E. ;
Garagnani, Paolo .
JOURNALS OF GERONTOLOGY SERIES A-BIOLOGICAL SCIENCES AND MEDICAL SCIENCES, 2017, 72 (08) :1015-1023
[5]   Methylomic Aging as a Window onto the Influence of Lifestyle: Tobacco and Alcohol Use Alter the Rate of Biological Aging [J].
Beach, Steven R. H. ;
Dogan, Meeshanthini V. ;
Lei, Man-Kit ;
Cutrona, Carolyn E. ;
Gerrard, Meg ;
Gibbons, Frederick X. ;
Simons, Ronald L. ;
Brody, Gene H. ;
Philibert, Robert A. .
JOURNAL OF THE AMERICAN GERIATRICS SOCIETY, 2015, 63 (12) :2519-2525
[6]   Delineation of a Human Mendelian Disorder of the DNA Demethylation Machinery: TET3 Deficiency [J].
Beck, David B. ;
Petracovici, Ana ;
He, Chongsheng ;
Moore, Hannah W. ;
Louie, Raymond J. ;
Ansar, Muhammad ;
Douzgou, Sofia ;
Sithambaram, Sivagamy ;
Cottrell, Trudie ;
Santos-Cortez, Regie Lyn P. ;
Prijoles, Eloise J. ;
Bend, Renee ;
Keren, Boris ;
Mignot, Cyril ;
Nougues, Marie-Christine ;
Ounap, Katrin ;
Reimand, Tiia ;
Pajusalu, Sander ;
Zahid, Muhammad ;
Saqib, Muhammad Arif Nadeem ;
Buratti, Julien ;
Seaby, Eleanor G. ;
McWalter, Kirsty ;
Telegrafi, Aida ;
Baldridge, Dustin ;
Shinawi, Marwan ;
Leal, Suzanne M. ;
Schaefer, G. Bradley ;
Stevenson, Roger E. ;
Banka, Siddharth ;
Bonasio, Roberto ;
Fahrner, Jill A. .
AMERICAN JOURNAL OF HUMAN GENETICS, 2020, 106 (02) :234-245
[7]   Proliferation-Dependent Alterations of the DNA Methylation Landscape Underlie Hematopoietic Stem Cell Aging [J].
Beerman, Isabel ;
Bock, Christoph ;
Garrison, Brian S. ;
Smith, Zachary D. ;
Gu, Hongcang ;
Meissner, Alexander ;
Rossi, Derrick J. .
CELL STEM CELL, 2013, 12 (04) :413-425
[8]   Improved age determination of blood and teeth samples using a selected set of DNA methylation markers [J].
Bekaert, Bram ;
Kamalandua, Aubeline ;
Zapico, Sara C. ;
Van de Voorde, Wim ;
Decorte, Ronny .
EPIGENETICS, 2015, 10 (10) :922-930
[9]   DNA methylation aging clocks: challenges and recommendations [J].
Bell, Christopher G. ;
Lowe, Robert ;
Adams, Peter D. ;
Baccarelli, Andrea A. ;
Beck, Stephan ;
Bell, Jordana T. ;
Christensen, Brock C. ;
Gladyshev, Vadim N. ;
Heijmans, Bastiaan T. ;
Horvath, Steve ;
Ideker, Trey ;
Issa, Jean-Pierre J. ;
Kelsey, Karl T. ;
Marioni, Riccardo E. ;
Reik, Wolf ;
Relton, Caroline L. ;
Schalkwyk, Leonard C. ;
Teschendorff, Andrew E. ;
Wagner, Wolfgang ;
Zhang, Kang ;
Rakyan, Vardhman K. .
GENOME BIOLOGY, 2019, 20 (01)
[10]   Faster ticking rate of the epigenetic clock is associated with faster pubertal development in girls [J].
Binder, Alexandra M. ;
Corvalan, Camila ;
Mericq, Veronica ;
Pereira, Ana ;
Santos, Jose Luis ;
Horvath, Steve ;
Shepherd, John ;
Michels, Karin B. .
EPIGENETICS, 2018, 13 (01) :85-94