共 50 条
- [1] Long road to long-read assemblyNature Methods, 2021, 18 : 125 - 129Vivien Marx论文数: 0 引用数: 0 h-index: 0机构: Nature Methods,
- [2] Democratizing long-read genome assemblyCELL SYSTEMS, 2021, 12 (10) : 945 - 947Kirsche, Melanie论文数: 0 引用数: 0 h-index: 0机构: Johns Hopkins Univ, Dept Comp Sci, Baltimore, MD 21205 USA Johns Hopkins Univ, Dept Comp Sci, Baltimore, MD 21205 USASchatz, Michael C.论文数: 0 引用数: 0 h-index: 0机构: Johns Hopkins Univ, Dept Comp Sci, Baltimore, MD 21205 USA Johns Hopkins Univ, Dept Biol, Baltimore, MD 21205 USA Johns Hopkins Univ, Dept Comp Sci, Baltimore, MD 21205 USA
- [3] Long-read genotyping with SLANG (Simple Long-read loci Assembly of Nanopore data for Genotyping)APPLICATIONS IN PLANT SCIENCES, 2022, 10 (03):Dorfner, Marco论文数: 0 引用数: 0 h-index: 0机构: Univ Regensburg, Inst Plant Sci, Univ Str 31, D-93053 Regensburg, BY, Germany Univ Regensburg, Inst Plant Sci, Univ Str 31, D-93053 Regensburg, BY, GermanyOtt, Tankred论文数: 0 引用数: 0 h-index: 0机构: Univ Regensburg, Inst Plant Sci, Univ Str 31, D-93053 Regensburg, BY, Germany Univ Regensburg, Inst Plant Sci, Univ Str 31, D-93053 Regensburg, BY, GermanyOtt, Philipp论文数: 0 引用数: 0 h-index: 0机构: Univ Regensburg, Inst Plant Sci, Univ Str 31, D-93053 Regensburg, BY, Germany Univ Regensburg, Inst Plant Sci, Univ Str 31, D-93053 Regensburg, BY, GermanyOberprieler, Christoph论文数: 0 引用数: 0 h-index: 0机构: Univ Regensburg, Inst Plant Sci, Univ Str 31, D-93053 Regensburg, BY, Germany Univ Regensburg, Inst Plant Sci, Univ Str 31, D-93053 Regensburg, BY, Germany
- [4] Long-read sequence and assembly of segmental duplicationsNATURE METHODS, 2019, 16 (01) : 88 - +Vollger, Mitchell R.论文数: 0 引用数: 0 h-index: 0机构: Univ Washington, Sch Med, Dept Genome Sci, Seattle, WA 98195 USA Univ Washington, Sch Med, Dept Genome Sci, Seattle, WA 98195 USADishuck, Philip C.论文数: 0 引用数: 0 h-index: 0机构: Univ Washington, Sch Med, Dept Genome Sci, Seattle, WA 98195 USA Univ Washington, Sch Med, Dept Genome Sci, Seattle, WA 98195 USASorensen, Melanie论文数: 0 引用数: 0 h-index: 0机构: Univ Washington, Sch Med, Dept Genome Sci, Seattle, WA 98195 USA Univ Washington, Sch Med, Dept Genome Sci, Seattle, WA 98195 USAWelch, AnneMarie E.论文数: 0 引用数: 0 h-index: 0机构: Univ Washington, Sch Med, Dept Genome Sci, Seattle, WA 98195 USA Univ Washington, Sch Med, Dept Genome Sci, Seattle, WA 98195 USADang, Vy论文数: 0 引用数: 0 h-index: 0机构: Univ Washington, Sch Med, Dept Genome Sci, Seattle, WA 98195 USA Univ Washington, Sch Med, Dept Genome Sci, Seattle, WA 98195 USADougherty, Max L.论文数: 0 引用数: 0 h-index: 0机构: Univ Washington, Sch Med, Dept Genome Sci, Seattle, WA 98195 USA Univ Washington, Sch Med, Dept Genome Sci, Seattle, WA 98195 USAGraves-Lindsay, Tina A.论文数: 0 引用数: 0 h-index: 0机构: Washington Univ, Sch Med, McDonnell Genome Inst, St Louis, MO USA Univ Washington, Sch Med, Dept Genome Sci, Seattle, WA 98195 USAWilson, Richard K.论文数: 0 引用数: 0 h-index: 0机构: Nationwide Childrens Hosp, Inst Genom Med, Columbus, OH USA Ohio State Univ, Coll Med, Dept Pediat, Columbus, OH 43210 USA Univ Washington, Sch Med, Dept Genome Sci, Seattle, WA 98195 USAChaisson, Mark J. P.论文数: 0 引用数: 0 h-index: 0机构: Univ Southern Calif, Los Angeles, CA 90007 USA Univ Washington, Sch Med, Dept Genome Sci, Seattle, WA 98195 USAEichler, Evan E.论文数: 0 引用数: 0 h-index: 0机构: Univ Washington, Sch Med, Dept Genome Sci, Seattle, WA 98195 USA Univ Washington, Howard Hughes Med Inst, Seattle, WA 98195 USA Univ Washington, Sch Med, Dept Genome Sci, Seattle, WA 98195 USA
- [5] Long-read sequence assembly of the gorilla genomeSCIENCE, 2016, 352 (6281)Gordon, David论文数: 0 引用数: 0 h-index: 0机构: Univ Washington, Sch Med, Dept Genome Sci, Seattle, WA 98195 USA Univ Washington, Howard Hughes Med Inst, Seattle, WA 98195 USA Univ Washington, Sch Med, Dept Genome Sci, Seattle, WA 98195 USAHuddleston, John论文数: 0 引用数: 0 h-index: 0机构: Univ Washington, Sch Med, Dept Genome Sci, Seattle, WA 98195 USA Univ Washington, Howard Hughes Med Inst, Seattle, WA 98195 USA Univ Washington, Sch Med, Dept Genome Sci, Seattle, WA 98195 USAChaisson, Mark J. P.论文数: 0 引用数: 0 h-index: 0机构: Univ Washington, Sch Med, Dept Genome Sci, Seattle, WA 98195 USA Univ Washington, Sch Med, Dept Genome Sci, Seattle, WA 98195 USAHill, Christopher M.论文数: 0 引用数: 0 h-index: 0机构: Univ Washington, Sch Med, Dept Genome Sci, Seattle, WA 98195 USA Univ Washington, Sch Med, Dept Genome Sci, Seattle, WA 98195 USAKronenberg, Zev N.论文数: 0 引用数: 0 h-index: 0机构: Univ Washington, Sch Med, Dept Genome Sci, Seattle, WA 98195 USA Univ Washington, Sch Med, Dept Genome Sci, Seattle, WA 98195 USAMunson, Katherine M.论文数: 0 引用数: 0 h-index: 0机构: Univ Washington, Sch Med, Dept Genome Sci, Seattle, WA 98195 USA Univ Washington, Sch Med, Dept Genome Sci, Seattle, WA 98195 USAMalig, Maika论文数: 0 引用数: 0 h-index: 0机构: Univ Washington, Sch Med, Dept Genome Sci, Seattle, WA 98195 USA Univ Washington, Sch Med, Dept Genome Sci, Seattle, WA 98195 USARaja, Archana论文数: 0 引用数: 0 h-index: 0机构: Univ Washington, Sch Med, Dept Genome Sci, Seattle, WA 98195 USA Univ Washington, Howard Hughes Med Inst, Seattle, WA 98195 USA Univ Washington, Sch Med, Dept Genome Sci, Seattle, WA 98195 USAFiddes, Ian论文数: 0 引用数: 0 h-index: 0机构: Univ Calif Santa Cruz, Genom Inst, Santa Cruz, CA 95064 USA Howard Hughes Med Inst, Santa Cruz, CA 95064 USA Univ Washington, Sch Med, Dept Genome Sci, Seattle, WA 98195 USAHillier, LaDeana W.论文数: 0 引用数: 0 h-index: 0机构: Washington Univ, Sch Med, McDonnell Genome Inst, Dept Med,Dept Genet, St Louis, MO 63108 USA Univ Washington, Sch Med, Dept Genome Sci, Seattle, WA 98195 USADunn, Christopher论文数: 0 引用数: 0 h-index: 0机构: Pacific Biosci Calif, Menlo Pk, CA 94025 USA Univ Washington, Sch Med, Dept Genome Sci, Seattle, WA 98195 USABaker, Carl论文数: 0 引用数: 0 h-index: 0机构: Univ Washington, Sch Med, Dept Genome Sci, Seattle, WA 98195 USA Univ Washington, Sch Med, Dept Genome Sci, Seattle, WA 98195 USAArmstrong, Joel论文数: 0 引用数: 0 h-index: 0机构: Univ Calif Santa Cruz, Genom Inst, Santa Cruz, CA 95064 USA Howard Hughes Med Inst, Santa Cruz, CA 95064 USA Univ Washington, Sch Med, Dept Genome Sci, Seattle, WA 98195 USADiekhans, Mark论文数: 0 引用数: 0 h-index: 0机构: Univ Calif Santa Cruz, Genom Inst, Santa Cruz, CA 95064 USA Howard Hughes Med Inst, Santa Cruz, CA 95064 USA Univ Washington, Sch Med, Dept Genome Sci, Seattle, WA 98195 USAPaten, Benedict论文数: 0 引用数: 0 h-index: 0机构: Univ Calif Santa Cruz, Genom Inst, Santa Cruz, CA 95064 USA Howard Hughes Med Inst, Santa Cruz, CA 95064 USA Univ Washington, Sch Med, Dept Genome Sci, Seattle, WA 98195 USAShendure, Jay论文数: 0 引用数: 0 h-index: 0机构: Univ Washington, Sch Med, Dept Genome Sci, Seattle, WA 98195 USA Univ Washington, Howard Hughes Med Inst, Seattle, WA 98195 USA Univ Washington, Sch Med, Dept Genome Sci, Seattle, WA 98195 USAWilson, Richard K.论文数: 0 引用数: 0 h-index: 0机构: Washington Univ, Sch Med, McDonnell Genome Inst, Dept Med,Dept Genet, St Louis, MO 63108 USA Univ Washington, Sch Med, Dept Genome Sci, Seattle, WA 98195 USAHaussler, David论文数: 0 引用数: 0 h-index: 0机构: Univ Calif Santa Cruz, Genom Inst, Santa Cruz, CA 95064 USA Howard Hughes Med Inst, Santa Cruz, CA 95064 USA Univ Washington, Sch Med, Dept Genome Sci, Seattle, WA 98195 USAChin, Chen-Shan论文数: 0 引用数: 0 h-index: 0机构: Pacific Biosci Calif, Menlo Pk, CA 94025 USA Univ Washington, Sch Med, Dept Genome Sci, Seattle, WA 98195 USAEichler, Evan E.论文数: 0 引用数: 0 h-index: 0机构: Univ Washington, Sch Med, Dept Genome Sci, Seattle, WA 98195 USA Univ Washington, Howard Hughes Med Inst, Seattle, WA 98195 USA Univ Washington, Sch Med, Dept Genome Sci, Seattle, WA 98195 USA
- [6] Long-read sequence and assembly of segmental duplicationsNature Methods, 2019, 16 : 88 - 94Mitchell R. Vollger论文数: 0 引用数: 0 h-index: 0机构: University of Washington School of Medicine,Department of Genome SciencesPhilip C. Dishuck论文数: 0 引用数: 0 h-index: 0机构: University of Washington School of Medicine,Department of Genome SciencesMelanie Sorensen论文数: 0 引用数: 0 h-index: 0机构: University of Washington School of Medicine,Department of Genome SciencesAnneMarie E. Welch论文数: 0 引用数: 0 h-index: 0机构: University of Washington School of Medicine,Department of Genome SciencesVy Dang论文数: 0 引用数: 0 h-index: 0机构: University of Washington School of Medicine,Department of Genome SciencesMax L. Dougherty论文数: 0 引用数: 0 h-index: 0机构: University of Washington School of Medicine,Department of Genome SciencesTina A. Graves-Lindsay论文数: 0 引用数: 0 h-index: 0机构: University of Washington School of Medicine,Department of Genome SciencesRichard K. Wilson论文数: 0 引用数: 0 h-index: 0机构: University of Washington School of Medicine,Department of Genome SciencesMark J. P. Chaisson论文数: 0 引用数: 0 h-index: 0机构: University of Washington School of Medicine,Department of Genome SciencesEvan E. Eichler论文数: 0 引用数: 0 h-index: 0机构: University of Washington School of Medicine,Department of Genome Sciences
- [7] Comparison and benchmark of structural variants detected from long read and long-read assemblyBRIEFINGS IN BIOINFORMATICS, 2023, 24 (04)Lin, Jiadong论文数: 0 引用数: 0 h-index: 0机构: Xi An Jiao Tong Univ, Sch Automat Sci & Engn, Xian 710049, Peoples R China Xi An Jiao Tong Univ, Sch Automat Sci & Engn, Xian 710049, Peoples R ChinaJia, Peng论文数: 0 引用数: 0 h-index: 0机构: Xi An Jiao Tong Univ, Sch Automat Sci & Engn, Xian 710049, Peoples R China Xi An Jiao Tong Univ, Sch Automat Sci & Engn, Xian 710049, Peoples R ChinaWang, Songbo论文数: 0 引用数: 0 h-index: 0机构: Xi An Jiao Tong Univ, Sch Automat Sci & Engn, Xian 710049, Peoples R China Xi An Jiao Tong Univ, Sch Automat Sci & Engn, Xian 710049, Peoples R ChinaKosters, Walter论文数: 0 引用数: 0 h-index: 0机构: Leiden Univ, Leiden Inst Adv Comp Sci, NL-2311 Leiden, Netherlands Xi An Jiao Tong Univ, Sch Automat Sci & Engn, Xian 710049, Peoples R ChinaYe, Kai论文数: 0 引用数: 0 h-index: 0机构: Xi An Jiao Tong Univ, Sch Automat Sci & Engn, Xian 710049, Peoples R China Xi An Jiao Tong Univ, Sch Automat Sci & Engn, Xian 710049, Peoples R China Xi An Jiao Tong Univ, Sch Automat Sci & Engn, Xian 710049, Peoples R China
- [8] BELLA: Berkeley Efficient Long-Read to Long-Read Aligner and OverlapperPROCEEDINGS OF THE 2021 SIAM CONFERENCE ON APPLIED AND COMPUTATIONAL DISCRETE ALGORITHMS, ACDA21, 2021, : 123 - 134Guidi, Giulia论文数: 0 引用数: 0 h-index: 0机构: Univ Calif Berkeley, Dept Elect Engn & Comp Sci, Berkeley, CA 94720 USA Lawrence Berkeley Natl Lab, Computat Res Div, Berkeley, CA 94720 USA Univ Calif Berkeley, Dept Elect Engn & Comp Sci, Berkeley, CA 94720 USAEllis, Marquita论文数: 0 引用数: 0 h-index: 0机构: Univ Calif Berkeley, Dept Elect Engn & Comp Sci, Berkeley, CA 94720 USA Lawrence Berkeley Natl Lab, Computat Res Div, Berkeley, CA 94720 USA Univ Calif Berkeley, Dept Elect Engn & Comp Sci, Berkeley, CA 94720 USARokhsar, Daniel论文数: 0 引用数: 0 h-index: 0机构: Univ Calif Berkeley, Dept Mol & Cell Biol, Berkeley, CA 94720 USA DOE Joint Genome Inst, Berkeley, CA USA Univ Calif Berkeley, Dept Elect Engn & Comp Sci, Berkeley, CA 94720 USAYelick, Katherine论文数: 0 引用数: 0 h-index: 0机构: Univ Calif Berkeley, Dept Elect Engn & Comp Sci, Berkeley, CA 94720 USA Lawrence Berkeley Natl Lab, Computat Res Div, Berkeley, CA 94720 USA Univ Calif Berkeley, Dept Elect Engn & Comp Sci, Berkeley, CA 94720 USABuluc, Aydin论文数: 0 引用数: 0 h-index: 0机构: Univ Calif Berkeley, Dept Elect Engn & Comp Sci, Berkeley, CA 94720 USA Lawrence Berkeley Natl Lab, Computat Res Div, Berkeley, CA 94720 USA Univ Calif Berkeley, Dept Elect Engn & Comp Sci, Berkeley, CA 94720 USA
- [9] Improving the genome assembly of rabbits with long-read sequencingGENOMICS, 2021, 113 (05) : 3216 - 3223Bai, Yiqin论文数: 0 引用数: 0 h-index: 0机构: Univ Chinese Acad Sci, Shanghai Inst Biochem & Cell Biol, State Key Lab Mol Biol, Ctr Excellence Mol Cell Sci,Chinese Acad Sci, Shanghai, Peoples R China Univ Chinese Acad Sci, Shanghai Inst Biochem & Cell Biol, State Key Lab Mol Biol, Ctr Excellence Mol Cell Sci,Chinese Acad Sci, Shanghai, Peoples R ChinaLin, Weili论文数: 0 引用数: 0 h-index: 0机构: Univ Chinese Acad Sci, Shanghai Inst Nutr & Hlth, Chinese Acad Sci, Biomed Big Data Ctr, Shanghai, Peoples R China Univ Chinese Acad Sci, Shanghai Inst Biochem & Cell Biol, State Key Lab Mol Biol, Ctr Excellence Mol Cell Sci,Chinese Acad Sci, Shanghai, Peoples R ChinaXu, Jie论文数: 0 引用数: 0 h-index: 0机构: Univ Michigan, Ctr Med, Ctr Adv Models Translat Sci & Therapeut, Ann Arbor, MI 48109 USA Univ Chinese Acad Sci, Shanghai Inst Biochem & Cell Biol, State Key Lab Mol Biol, Ctr Excellence Mol Cell Sci,Chinese Acad Sci, Shanghai, Peoples R ChinaSong, Jun论文数: 0 引用数: 0 h-index: 0机构: Univ Michigan, Ctr Med, Ctr Adv Models Translat Sci & Therapeut, Ann Arbor, MI 48109 USA Univ Chinese Acad Sci, Shanghai Inst Biochem & Cell Biol, State Key Lab Mol Biol, Ctr Excellence Mol Cell Sci,Chinese Acad Sci, Shanghai, Peoples R ChinaYang, Dongshan论文数: 0 引用数: 0 h-index: 0机构: Univ Michigan, Ctr Med, Ctr Adv Models Translat Sci & Therapeut, Ann Arbor, MI 48109 USA Univ Chinese Acad Sci, Shanghai Inst Biochem & Cell Biol, State Key Lab Mol Biol, Ctr Excellence Mol Cell Sci,Chinese Acad Sci, Shanghai, Peoples R ChinaChen, Y. Eugene论文数: 0 引用数: 0 h-index: 0机构: Univ Michigan, Ctr Med, Ctr Adv Models Translat Sci & Therapeut, Ann Arbor, MI 48109 USA Univ Chinese Acad Sci, Shanghai Inst Biochem & Cell Biol, State Key Lab Mol Biol, Ctr Excellence Mol Cell Sci,Chinese Acad Sci, Shanghai, Peoples R ChinaLi, Lin论文数: 0 引用数: 0 h-index: 0机构: Univ Chinese Acad Sci, Shanghai Inst Biochem & Cell Biol, State Key Lab Mol Biol, Ctr Excellence Mol Cell Sci,Chinese Acad Sci, Shanghai, Peoples R China Univ Chinese Acad Sci, Hangzhou Inst Adv Study, Sch Life Sci, Hangzhou, Peoples R China Univ Chinese Acad Sci, Shanghai Inst Biochem & Cell Biol, State Key Lab Mol Biol, Ctr Excellence Mol Cell Sci,Chinese Acad Sci, Shanghai, Peoples R ChinaLi, Yixue论文数: 0 引用数: 0 h-index: 0机构: Univ Chinese Acad Sci, Shanghai Inst Nutr & Hlth, Chinese Acad Sci, Biomed Big Data Ctr, Shanghai, Peoples R China Univ Chinese Acad Sci, Hangzhou Inst Adv Study, Sch Life Sci, Hangzhou, Peoples R China Fudan Univ, Collaborat Innovat Ctr Genet & Dev, Shanghai, Peoples R China Univ Chinese Acad Sci, Shanghai Inst Biochem & Cell Biol, State Key Lab Mol Biol, Ctr Excellence Mol Cell Sci,Chinese Acad Sci, Shanghai, Peoples R ChinaWang, Zhen论文数: 0 引用数: 0 h-index: 0机构: Univ Chinese Acad Sci, Shanghai Inst Nutr & Hlth, Chinese Acad Sci, Biomed Big Data Ctr, Shanghai, Peoples R China Univ Chinese Acad Sci, Shanghai Inst Biochem & Cell Biol, State Key Lab Mol Biol, Ctr Excellence Mol Cell Sci,Chinese Acad Sci, Shanghai, Peoples R ChinaZhang, Jifeng论文数: 0 引用数: 0 h-index: 0机构: Univ Michigan, Ctr Med, Ctr Adv Models Translat Sci & Therapeut, Ann Arbor, MI 48109 USA Univ Chinese Acad Sci, Shanghai Inst Biochem & Cell Biol, State Key Lab Mol Biol, Ctr Excellence Mol Cell Sci,Chinese Acad Sci, Shanghai, Peoples R China
- [10] Plastid Genome Assembly Using Long-read dataMOLECULAR ECOLOGY RESOURCES, 2023, 23 (06) : 1442 - 1457Zhou, Wenbin论文数: 0 引用数: 0 h-index: 0机构: Univ North Carolina Chapel Hill, Dept Biol, Chapel Hill, NC 27599 USA Univ North Carolina Chapel Hill, Dept Biol, Chapel Hill, NC 27599 USAArmijos, Carolina E.论文数: 0 引用数: 0 h-index: 0机构: Univ San Francisco Quito USFQ, Lab Biotecnol Vegetal, Quito, Ecuador Univ North Carolina Chapel Hill, Dept Biol, Chapel Hill, NC 27599 USALee, Chaehee论文数: 0 引用数: 0 h-index: 0机构: Univ Calif Davis, Dept Plant Sci, Davis, CA USA Univ North Carolina Chapel Hill, Dept Biol, Chapel Hill, NC 27599 USALu, Ruisen论文数: 0 引用数: 0 h-index: 0机构: Jiangsu Prov & Chinese Acad Sci, Inst Bot, Nanjing, Peoples R China Univ North Carolina Chapel Hill, Dept Biol, Chapel Hill, NC 27599 USAWang, Jeremy论文数: 0 引用数: 0 h-index: 0机构: Univ North Carolina Chapel Hill, Dept Genet, Chapel Hill, NC USA Univ North Carolina Chapel Hill, Dept Biol, Chapel Hill, NC 27599 USARuhlman, Tracey A.论文数: 0 引用数: 0 h-index: 0机构: Univ Texas Austin, Dept Integrat Biol, Austin, TX USA Univ North Carolina Chapel Hill, Dept Biol, Chapel Hill, NC 27599 USAJansen, Robert K.论文数: 0 引用数: 0 h-index: 0机构: Univ Texas Austin, Dept Integrat Biol, Austin, TX USA Univ North Carolina Chapel Hill, Dept Biol, Chapel Hill, NC 27599 USAJones, Alan M.论文数: 0 引用数: 0 h-index: 0机构: Univ North Carolina Chapel Hill, Dept Biol, Chapel Hill, NC 27599 USA Univ North Carolina Chapel Hill, Dept Pharmacol, Chapel Hill, NC USA Univ North Carolina Chapel Hill, Dept Biol, Chapel Hill, NC 27599 USAJones, Corbin D.论文数: 0 引用数: 0 h-index: 0机构: Univ North Carolina Chapel Hill, Dept Biol, Chapel Hill, NC 27599 USA Univ North Carolina Chapel Hill, Dept Genet, Chapel Hill, NC USA Univ North Carolina Chapel Hill, Dept Biol, Chapel Hill, NC 27599 USA