Bacterial growth: global effects on gene expression, growth feedback and proteome partition

被引:147
作者
Klumpp, Stefan [1 ]
Hwa, Terence [2 ,3 ,4 ]
机构
[1] Max Planck Inst Colloids & Interfaces, D-14424 Potsdam, Germany
[2] Univ Calif San Diego, Dept Phys, La Jolla, CA 92093 USA
[3] Univ Calif San Diego, Ctr Theoret Biol Phys, La Jolla, CA 92093 USA
[4] Univ Calif San Diego, Div Biol Sci, Mol Biol Sect, La Jolla, CA 92093 USA
基金
美国国家科学基金会;
关键词
SYNTHETIC BIOLOGY; TRANSCRIPTIONAL REGULATION; POSITIVE FEEDBACK; PERSISTENCE; SYSTEMS; REPLICATION; MECHANISMS; OPTIMALITY; PHYSIOLOGY;
D O I
10.1016/j.copbio.2014.01.001
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
The function of endogenous as well as synthetic genetic circuits is generically coupled to the physiological state of the cell. For exponentially growing bacteria, a key characteristic of the state of the cell is the growth rate and thus gene expression is often growth-rate dependent. Here we review recent results on growth-rate dependent gene expression. We distinguish different types of growth-rate dependencies by the mechanisms of regulation involved and the presence or absence of an effect of the gene product on growth. The latter can lead to growth feedback, feedback mediated by changes of the global state of the cell. Moreover, we discuss how growth rate dependence can be used as a guide to study the molecular implementation of physiological regulation.
引用
收藏
页码:96 / 102
页数:7
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