Coupled molecular-dynamics and finite-element-method simulations for the kinetics of particles subjected to field-mediated forces

被引:1
作者
Cascio, Michele [1 ,2 ,3 ]
Baroli, Davide [4 ]
Bordas, Stephane [4 ]
Deretzis, Ioannis [2 ]
Falci, Giuseppe [1 ,3 ]
Magliano, Antonino [2 ]
La Magna, Antonino [2 ]
机构
[1] Univ Catania, Dept Phys & Astron, Via S Sofia 64, I-95123 Catania, Italy
[2] CNR IMM, ZI Str 8 5, I-95121 Catania, Italy
[3] INFN Catania, Via S Sofia 62, I-95123 Catania, Italy
[4] Univ Luxembourg, Inst Computat Engn, Maison Nombre 6,Ave Fonte, L-4364 Esch Sur Alzette, Luxembourg
关键词
SUPERPARAMAGNETIC NANOPARTICLES; DIELECTROPHORETIC SEPARATION; HIGH-THROUGHPUT; CANCER-CELLS; MAGNETOPHORESIS; BLOOD; MANIPULATION; NANOTUBES;
D O I
10.1103/PhysRevE.99.063307
中图分类号
O35 [流体力学]; O53 [等离子体物理学];
学科分类号
070204 ; 080103 ; 080704 ;
摘要
A computational approach that couples molecular-dynamics (MD) and the-finite-element-method (FEM) technique is here proposed for the theoretical study of the dynamics of particles subjected to electromechanical forces. The system consists of spherical particles (modeled as micrometric rigid bodies with proper densities and dielectric functions) suspended in a colloidal solution, which flows in a microfluidic channel in the presence of a generic nonuniform variable electric field generated by electrodes. The particles are subjected to external forces (e.g., drag or gravity) which satisfy a particlelike formulation that is typical of the MD approach, along with an electromechanical force that, in turn, requires the three-dimensional self-consistent solutions of correct continuum field equations during the integration of the equations of motion. In the MD-FEM method used in this work, the finite element method is applied to solve the continuum field equations while the MD technique is used for the stepwise explicit integration of the equations of motion. Our work shows the potential of coupled MD-FEM simulations for the study of electromechanical particles and opens a double perspective for implementing (a) MD away from the field of atomistic simulations and (b) the continuum-particle approach to cases where the conventional force evaluation used in MD is not applicable.
引用
收藏
页数:13
相关论文
共 58 条
[1]   Superpositioned dielectrophoresis for enhanced trapping efficiency [J].
Aldaeus, F ;
Lin, Y ;
Roeraade, J ;
Amberg, G .
ELECTROPHORESIS, 2005, 26 (22) :4252-4259
[2]  
Allen M.P., 2004, NIC Series, V23
[3]  
[Anonymous], 2002, Understanding molecular simulation: from algorithms to applications
[4]   Quantitative assessment of dielectrophoresis as a micro fluidic retention and separation technique for beads and human blood erythrocytes [J].
Auerswald, J ;
Knapp, HF .
MICROELECTRONIC ENGINEERING, 2003, 67-8 :879-886
[5]   SEPARATION OF HUMAN BREAST-CANCER CELLS FROM BLOOD BY DIFFERENTIAL DIELECTRIC AFFINITY [J].
BECKER, FF ;
WANG, XB ;
HUANG, Y ;
PETHIG, R ;
VYKOUKAL, J ;
GASCOYNE, PRC .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1995, 92 (03) :860-864
[6]   Magnetophoresis of colloidal particles in a dispersion of superparamagnetic nanoparticles: theory and experiments [J].
Benelmekki, M. ;
Martinez, Ll M. ;
Andreu, J. S. ;
Camacho, J. ;
Faraudo, J. .
SOFT MATTER, 2012, 8 (22) :6039-6047
[7]   Calculation of the dielectrophoretic force in biological microsystems: comparison of a dipolar model with the Maxwell tensor method [J].
Benselama, AM ;
Pham, P ;
Atten, P .
JOURNAL OF ELECTROSTATICS, 2006, 64 (7-9) :437-444
[8]   Analysis of the role of the particle-wall interaction on the separation efficiencies of field flow fractionation dielectrophoretic devices [J].
Camarda, Massimo ;
Scalese, Silvia ;
La Magna, Antonino .
ELECTROPHORESIS, 2015, 36 (13) :1396-1404
[9]   Theoretical and experimental study of the role of cell-cell dipole interaction in dielectrophoretic devices: application to polynomial electrodes [J].
Camarda, Massimo ;
Fisicaro, Giuseppe ;
Anzalone, Ruggero ;
Scalese, Silvia ;
Alberti, Alessandra ;
La Via, Francesco ;
La Magna, Antonino ;
Ballo, Andrea ;
Giustolisi, Gianluca ;
Minafra, Luigi ;
Cammarata, Francesco P. ;
Bravata, Valentina ;
Forte, Giusi I. ;
Russo, Giorgio ;
Gilardi, Maria C. .
BIOMEDICAL ENGINEERING ONLINE, 2014, 13
[10]   A numerical analysis of forces imposed on particles in conventional dielectrophoresis in microchannels with interdigitated electrodes [J].
Cao, Jun ;
Cheng, Ping ;
Hong, Fangjun .
JOURNAL OF ELECTROSTATICS, 2008, 66 (11-12) :620-626