Announcing mandatory submission of PDBx/mmCIF format files for crystallographic depositions to the Protein Data Bank (PDB)

被引：45

作者：

Adams, Paul D. ^{[1
,2
]}

Afonine, Pavel V. ^{[1
]}

Baskaran, Kumaran ^{[3
]}

Berman, Helen M. ^{[4
]}

Berrisford, John ^{[5
]}

Bricogne, Gerard ^{[6
]}

Brown, David G. ^{[7
]}

Burley, Stephen K. ^{[4
,8
,9
]}

Chen, Minyu ^{[10
]}

Feng, Zukang ^{[4
]}

Flensburg, Claus ^{[6
]}

Gutmanas, Aleksandras ^{[5
]}

Hoch, Jeffrey C. ^{[11
]}

Ikegawa, Yasuyo ^{[10
]}

Kengaku, Yumiko ^{[10
]}

Krissinel, Eugene ^{[12
]}

Kurisu, Genji ^{[10
]}

Liang, Yuhe ^{[4
]}

Liebschner, Dorothee ^{[1
]}

Mak, Lora ^{[5
]}

Markley, John L. ^{[3
]}

Moriarty, Nigel W. ^{[1
]}

Murshudov, Garib N. ^{[13
]}

Noble, Martin ^{[14
]}

Peisach, Ezra ^{[4
]}

Persikova, Irina ^{[4
]}

Poon, Billy K. ^{[1
]}

Sobolev, Oleg V. ^{[1
]}

Ulrich, Eldon L. ^{[3
]}

Velankar, Sameer ^{[5
]}

Vonrhein, Clemens ^{[6
]}

Westbrook, John ^{[4
]}

Wojdyr, Marcin ^{[6
,12
]}

Yokochi, Masashi ^{[10
]}

Young, Jasmine Y. ^{[4
]}

机构：

[1] Lawrence Berkeley Natl Lab, Mol Biophys & Integrated Bioimaging Div, Berkeley, CA 94720 USA

[2] Univ Calif Berkeley, Dept Bioengn, Berkeley, CA 94720 USA

[3] Univ Wisconsin, BioMagResBank BMRB, Madison, WI 53706 USA

[4] Rutgers State Univ, Inst Quantitat Biomed, RCSB PDB, Piscataway, NJ 08854 USA

[5] European Bioinformat Inst EMBL EBI, European Mol Biol Lab, Prot Data Bank Europe PDBe, Wellcome Genome Campus, Hinxton CB10 1SD, Cambs, England

[6] Global Phasing Ltd, Sheraton House,Castle Pk, Cambridge CB3 0AX, England

[7] Univ Kent, Sch Biosci, Canterbury CT2 7NJ, Kent, England

[8] Univ Med & Dent New Jersey, Rutgers Canc Inst New Jersey, New Brunswick, NJ 08903 USA

[9] Univ Calif San Diego, San Diego Supercomp Ctr, RCSB PDB, La Jolla, CA 92093 USA

[10] Osaka Univ, Inst Prot Res, Prot Data Bank Japan PDBj, Osaka 5650871, Japan

[11] UConn Hlth, BioMagResBank BMRB, 263 Farmington Ave, Farmington, CT 06030 USA

[12] Rutherford Appleton Lab, RCaH, CCP4, Didcot OX11 0FA, Oxon, England

[13] Cambridge Biomed Campus, MRC Lab Mol Biol, Francis Crick Ave, Cambridge CB2 0QH, England

[14] Newcastle Univ, Framlington Pl, Newcastle Upon Tyne NE2 4HH, Tyne & Wear, England

来源：

ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY | 2019年 / 75卷

基金：

英国惠康基金; 日本科学技术振兴机构; 英国生物技术与生命科学研究理事会; 美国国家卫生研究院; 美国国家科学基金会;

关键词：

PDB; mmCIF; OneDep; wwPDB; data dictionary; data archiving; biocuration; validation; macromolecular crystallography; data standards; PDBx; mmCIF format; Protein Data Bank; Worldwide Protein Data Bank; INFORMATION FILE; REFINEMENT; REPRESENTATION; VISUALIZATION; EXTENSION; SASCIF;

D O I：

10.1107/S2059798319004522

中图分类号：

Q5 [生物化学];

学科分类号：

071010 ; 081704 ;

摘要：

This letter announces that PDBx/mmCIF format files will become mandatory for crystallographic depositions to the Protein Data Bank (PDB).

引用

页码：451 / 454

页数：4

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