Anisotropic protein-protein interactions due to ion binding

被引:24
|
作者
Lund, Mikael [1 ]
机构
[1] Lund Univ, Div Theoret Chem, SE-22100 Lund, Sweden
基金
瑞典研究理事会;
关键词
Anisotropic interactions; Protein-protein interactions; Electrostatics; Multipoles; Monte Carlo simulation; Coarse graining; CHARGE; ELECTROSTATICS; CONDENSATION; ASSOCIATION; SIMULATIONS; LYSOZYME; PH;
D O I
10.1016/j.colsurfb.2015.05.054
中图分类号
Q6 [生物物理学];
学科分类号
071011 ;
摘要
Self-association of proteins is strongly affected by long-range electrostatic interactions caused by equilibrium adsorption of small ions such as protons and multivalent metals. By affecting the molecular net charge, solution pH is thus a widely used parameter to tune stability and phase behavior of proteins. We here review recent studies where the charge distribution is perturbed not only by protons, but also by other binding ions, leading to a rich and inherently anisotropic charge distribution. Focus is on coarse grained simulation techniques, coupled to experiments of protein-protein interaction at varying salt and pH conditions. Finally, and with future bio-colloidal models in mind, we discuss the validity of coarse graining charge anisotropy using electric multipoles. (C) 2015 Elsevier B.V. All rights reserved.
引用
收藏
页码:17 / 21
页数:5
相关论文
共 50 条
  • [31] Effects of protein-protein interactions and ligand binding on the ion permeation in KCNQ1 potassium channel
    Hasani, Horia Jalily
    Ganesan, Aravindhan
    Ahmed, Marawan
    Barakat, Khaled H.
    PLOS ONE, 2018, 13 (02):
  • [32] Protein-protein interactions of the copine family of proteins: The domain as a protein binding motif
    Tomsig, JL
    Snyder, SL
    Creutz, CE
    FASEB JOURNAL, 2003, 17 (05): : A1027 - A1027
  • [33] A Simple Method to Detect the Inhibition of Transcription Factor-DNA Binding Due to Protein-Protein Interactions In Vivo
    Yang, Guangzhe
    Chao, Dong
    Ming, Zhenhua
    Xia, Jixing
    GENES, 2019, 10 (09)
  • [34] Use of azidophenothiazines to study binding in proteins and in protein-protein interactions.
    DeLaLuz, PJ
    Golinski, M
    Watt, DS
    Vanaman, TC
    FASEB JOURNAL, 1996, 10 (06): : 2275 - 2275
  • [35] Modulating Protein-Protein Interactions with Small Molecules: The Importance of Binding Hotspots
    Thangudu, Ratna Rajesh
    Bryant, Stephen H.
    Panchenko, Anna R.
    Madej, Thomas
    JOURNAL OF MOLECULAR BIOLOGY, 2012, 415 (02) : 443 - 453
  • [36] Understanding Protein-Protein Interactions through Comprehensive Mapping of Binding Landscapes
    Shifman, Julia
    Heyne, Michael
    Cohen, Itay
    Peleg, Yoav
    Shirian, Jason
    Papo, Niv
    PROTEIN SCIENCE, 2018, 27 : 77 - 77
  • [37] Binding interface change and cryptic variation in the evolution of protein-protein interactions
    Ames, Ryan M.
    Talavera, David
    Williams, Simon G.
    Robertson, David L.
    Lovell, Simon C.
    BMC EVOLUTIONARY BIOLOGY, 2016, 16
  • [38] Binding interface change and cryptic variation in the evolution of protein-protein interactions
    Ryan M. Ames
    David Talavera
    Simon G. Williams
    David L. Robertson
    Simon C. Lovell
    BMC Evolutionary Biology, 16
  • [39] Protein-protein interactions: Interface structure, binding thermodynamics, and mutational analysis
    Stites, WE
    CHEMICAL REVIEWS, 1997, 97 (05) : 1233 - 1250
  • [40] Allosteric modulation of protein-protein interactions by individual lipid binding events
    Xiao Cong
    Yang Liu
    Wen Liu
    Xiaowen Liang
    Arthur Laganowsky
    Nature Communications, 8