The EcoCyc database: reflecting new knowledge about Escherichia coli K-12

被引：389

作者：

Keseler, Ingrid M. ^{[1
]}

Mackie, Amanda ^{[2
]}

Santos-Zavaleta, Alberto ^{[3
]}

Billington, Richard ^{[1
]}

Bonavides-Martinez, Cesar ^{[3
]}

Caspi, Ron ^{[1
]}

Fulcher, Carol ^{[1
]}

Gama-Castro, Socorro ^{[3
]}

Kothari, Anamika ^{[1
]}

Krummenacker, Markus ^{[1
]}

Latendresse, Mario ^{[1
]}

Muniz-Rascado, Luis

Ong, Quang ^{[1
]}

Paley, Suzanne ^{[1
]}

Peralta-Gil, Martin ^{[3
]}

Subhraveti, Pallavi ^{[1
]}

Velazquez-Ramirez, David A. ^{[3
]}

Weaver, Daniel ^{[1
]}

Collado-Vides, Julio ^{[3
]}

Paulsen, Ian ^{[2
]}

Karp, Peter D. ^{[1
]}

机构：

[1] SRI Int, 333 Ravenswood Ave, Menlo Pk, CA 94025 USA

[2] Macquarie Univ, Dept Chem & Biomol Sci, Sydney, NSW 2109, Australia

[3] Univ Nacl Autonoma Mexico, Ctr Ciencias Genomicas, Programa Genom Computac, Morelos 62100, Mexico

来源：

NUCLEIC ACIDS RESEARCH | 2017年 / 45卷 / D1期

基金：

美国国家卫生研究院;

关键词：

TRANSCRIPTION FACTOR; SULFUR CYCLE; TRANSPORTER; REGULATOR; GENE; CYSTINE; PROTEIN; SUSCEPTIBILITY; IDENTIFICATION; BIOSYNTHESIS;

D O I：

10.1093/nar/gkw1003

中图分类号：

Q5 [生物化学]; Q7 [分子生物学];

学科分类号：

071010 ; 081704 ;

摘要：

EcoCyc (EcoCyc.org) is a freely accessible, comprehensive database that collects and summarizes experimental data for Escherichia coli K-12, the beststudied bacterial model organism. New experimental discoveries about gene products, their function and regulation, new metabolic pathways, enzymes and cofactors are regularly added to EcoCyc. New SmartTable tools allow users to browse collections of related EcoCyc content. SmartTables can also serve as repositories for user-or curator-generated lists. EcoCyc now supports running and modifying E. coli metabolic models directly on the EcoCyc website.

引用

页码：D543 / D550

页数：8

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