MLEM deconvolution of protein X-ray diffraction images based on a multiple-PSF model

被引:0
作者
Zhu, D
Razaz, M
Hemmings, A
机构
[1] Univ E Anglia, Sch Comp Sci, Norwich NR4 7TJ, Norfolk, England
[2] Univ E Anglia, Sch Biol Sci, Norwich NR4 7TJ, Norfolk, England
[3] Univ E Anglia, Sch Chem Sci & Pharm, Norwich NR4 7TJ, Norfolk, England
关键词
deconvolution; diffuse light distortion (DLD); maximum likelihood; X-ray diffraction;
D O I
10.1109/TNB.2006.875046
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
In this paper we analyze the degradation of protein X-ray diffraction images by diffuse light distortion (DLD). In order to correct the degradation, a new multiple point spread function (PSF) model is introduced and used to restore X-ray diffraction image data (XRD). Raw PSFs are collected from isolated spots in high-resolution areas on the diffraction patterns which represent the orientation of DLDs. An adaptive ridge regression (ARR) technique is used to remove noise from the raw PSF data. A target Gaussian function is used to model the raw PSFs. A maximum likelihood expectation maximization (MLEM) algorithm combined with a multi-PSF model is employed to restore high intensity, asymmetrical protein X-ray diffraction data. Experimental results using a single and multiple PSFs are presented and discussed. We show that using a multiple PSF model in the deconvolution algorithm improved the quality of the XRD and as a result the spot integration error (chi(2)) and corresponding electron density mapare improved.
引用
收藏
页码:95 / 102
页数:8
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