HUMAN GUT MICROBIOTA;
CAENI SP NOV;
BACTERIAL COMMUNITY;
ACTIVATED-SLUDGE;
DIVERSITY;
ATTACHMENT;
PRIMERS;
BIAS;
SOIL;
D O I:
10.1128/AEM.03001-13
中图分类号:
Q81 [生物工程学(生物技术)];
Q93 [微生物学];
学科分类号:
071005 ;
0836 ;
090102 ;
100705 ;
摘要:
The impact of substratum surface property change on biofilm community structure was investigated using laboratory biological aerated filter (BAF) reactors and molecular microbial community analysis. Two substratum surfaces that differed in surface properties were created via surface coating and used to develop biofilms in test (modified surface) and control (original surface) BAF reactors. Microbial community analysis by 16S rRNA gene-based PCR-denaturing gradient gel electrophoresis (DGGE) showed that the surface property change consistently resulted in distinct profiles of microbial populations during replicate reactor start-ups. Pyrosequencing of the bar-coded 16S rRNA gene amplicons surveyed more than 90% of the microbial diversity in the microbial communities and identified 72 unique bacterial species within 19 bacterial orders. Among the 19 orders of bacteria detected, Burkholderiales and Rhodocyclales of the Betaproteobacteria class were numerically dominant and accounted for 90.5 to 97.4% of the sequence reads, and their relative abundances in the test and control BAF reactors were different in consistent patterns during the two reactor start-ups. Three of the five dominant bacterial species also showed consistent relative abundance changes between the test and control BAF reactors. The different biofilm microbial communities led to different treatment efficiencies, with consistently higher total organic carbon (TOC) removal in the test reactor than in the control reactor. Further understanding of how surface properties affect biofilm microbial communities and functional performance would enable the rational design of new generations of substrata for the improvement of biofilm-based biological treatment processes.
机构:
Harbin Inst Technol, State Key Lab Water Resource & Environm, Harbin 150090, Peoples R China
Natl Taiwan Univ, Dept Chem Engn, Taipei 10617, TaiwanHarbin Inst Technol, State Key Lab Water Resource & Environm, Harbin 150090, Peoples R China
Adav, Sunil S.
Lee, Duu-Jong
论文数: 0引用数: 0
h-index: 0
机构:
Harbin Inst Technol, State Key Lab Water Resource & Environm, Harbin 150090, Peoples R China
Natl Taiwan Univ, Dept Chem Engn, Taipei 10617, TaiwanHarbin Inst Technol, State Key Lab Water Resource & Environm, Harbin 150090, Peoples R China
Lee, Duu-Jong
Lai, J. Y.
论文数: 0引用数: 0
h-index: 0
机构:
Chung Yuan Christian Univ, Dept Chem Engn, Ctr Membrane Technol, Chungli 32023, TaiwanHarbin Inst Technol, State Key Lab Water Resource & Environm, Harbin 150090, Peoples R China
机构:
AlbaNova Univ Ctr, Royal Inst Technol, Dept Environm Microbiol, S-10691 Stockholm, SwedenAlbaNova Univ Ctr, Royal Inst Technol, Dept Environm Microbiol, S-10691 Stockholm, Sweden
Andersson, Sofia
Rajarao, Gunaratna Kuttuva
论文数: 0引用数: 0
h-index: 0
机构:
AlbaNova Univ Ctr, Royal Inst Technol, Dept Environm Microbiol, S-10691 Stockholm, SwedenAlbaNova Univ Ctr, Royal Inst Technol, Dept Environm Microbiol, S-10691 Stockholm, Sweden
Rajarao, Gunaratna Kuttuva
Land, Carl Johan
论文数: 0引用数: 0
h-index: 0
机构:
AlbaNova Univ Ctr, Royal Inst Technol, Dept Environm Microbiol, S-10691 Stockholm, SwedenAlbaNova Univ Ctr, Royal Inst Technol, Dept Environm Microbiol, S-10691 Stockholm, Sweden
Land, Carl Johan
Dalhammar, Gunnel
论文数: 0引用数: 0
h-index: 0
机构:
AlbaNova Univ Ctr, Royal Inst Technol, Dept Environm Microbiol, S-10691 Stockholm, SwedenAlbaNova Univ Ctr, Royal Inst Technol, Dept Environm Microbiol, S-10691 Stockholm, Sweden
机构:
Beijing Forestry Univ, Beijing Key Lab Source Control Technol Water Poll, Beijing 100083, Peoples R ChinaBeijing Forestry Univ, Beijing Key Lab Source Control Technol Water Poll, Beijing 100083, Peoples R China
Chen, Sheng
Cheng, Xiang
论文数: 0引用数: 0
h-index: 0
机构:
Beijing Forestry Univ, Beijing Key Lab Source Control Technol Water Poll, Beijing 100083, Peoples R ChinaBeijing Forestry Univ, Beijing Key Lab Source Control Technol Water Poll, Beijing 100083, Peoples R China
Cheng, Xiang
Zhang, Xu
论文数: 0引用数: 0
h-index: 0
机构:
Beijing Forestry Univ, Beijing Key Lab Source Control Technol Water Poll, Beijing 100083, Peoples R ChinaBeijing Forestry Univ, Beijing Key Lab Source Control Technol Water Poll, Beijing 100083, Peoples R China
Zhang, Xu
Sun, Dezhi
论文数: 0引用数: 0
h-index: 0
机构:
Beijing Forestry Univ, Beijing Key Lab Source Control Technol Water Poll, Beijing 100083, Peoples R ChinaBeijing Forestry Univ, Beijing Key Lab Source Control Technol Water Poll, Beijing 100083, Peoples R China
机构:
Stanford Univ, Dept Microbiol & Immunol, Stanford, CA 94305 USA
Stanford Univ, Dept Med, Stanford, CA 94305 USAStanford Univ, Dept Microbiol & Immunol, Stanford, CA 94305 USA
Dethlefsen, Les
Huse, Sue
论文数: 0引用数: 0
h-index: 0
机构:
Marine Biol Lab, Josephine Bay Paul Ctr Comparat Mol Biol & Evolut, Woods Hole, MA 02543 USAStanford Univ, Dept Microbiol & Immunol, Stanford, CA 94305 USA
Huse, Sue
Sogin, Mitchell L.
论文数: 0引用数: 0
h-index: 0
机构:
Marine Biol Lab, Josephine Bay Paul Ctr Comparat Mol Biol & Evolut, Woods Hole, MA 02543 USAStanford Univ, Dept Microbiol & Immunol, Stanford, CA 94305 USA
Sogin, Mitchell L.
Relman, David A.
论文数: 0引用数: 0
h-index: 0
机构:
Stanford Univ, Dept Microbiol & Immunol, Stanford, CA 94305 USA
Stanford Univ, Dept Med, Stanford, CA 94305 USA
Vet Affairs Palo Alto Hlth Care Syst, Palo Alto, CA USAStanford Univ, Dept Microbiol & Immunol, Stanford, CA 94305 USA
机构:
Harbin Inst Technol, State Key Lab Water Resource & Environm, Harbin 150090, Peoples R China
Natl Taiwan Univ, Dept Chem Engn, Taipei 10617, TaiwanHarbin Inst Technol, State Key Lab Water Resource & Environm, Harbin 150090, Peoples R China
Adav, Sunil S.
Lee, Duu-Jong
论文数: 0引用数: 0
h-index: 0
机构:
Harbin Inst Technol, State Key Lab Water Resource & Environm, Harbin 150090, Peoples R China
Natl Taiwan Univ, Dept Chem Engn, Taipei 10617, TaiwanHarbin Inst Technol, State Key Lab Water Resource & Environm, Harbin 150090, Peoples R China
Lee, Duu-Jong
Lai, J. Y.
论文数: 0引用数: 0
h-index: 0
机构:
Chung Yuan Christian Univ, Dept Chem Engn, Ctr Membrane Technol, Chungli 32023, TaiwanHarbin Inst Technol, State Key Lab Water Resource & Environm, Harbin 150090, Peoples R China
机构:
AlbaNova Univ Ctr, Royal Inst Technol, Dept Environm Microbiol, S-10691 Stockholm, SwedenAlbaNova Univ Ctr, Royal Inst Technol, Dept Environm Microbiol, S-10691 Stockholm, Sweden
Andersson, Sofia
Rajarao, Gunaratna Kuttuva
论文数: 0引用数: 0
h-index: 0
机构:
AlbaNova Univ Ctr, Royal Inst Technol, Dept Environm Microbiol, S-10691 Stockholm, SwedenAlbaNova Univ Ctr, Royal Inst Technol, Dept Environm Microbiol, S-10691 Stockholm, Sweden
Rajarao, Gunaratna Kuttuva
Land, Carl Johan
论文数: 0引用数: 0
h-index: 0
机构:
AlbaNova Univ Ctr, Royal Inst Technol, Dept Environm Microbiol, S-10691 Stockholm, SwedenAlbaNova Univ Ctr, Royal Inst Technol, Dept Environm Microbiol, S-10691 Stockholm, Sweden
Land, Carl Johan
Dalhammar, Gunnel
论文数: 0引用数: 0
h-index: 0
机构:
AlbaNova Univ Ctr, Royal Inst Technol, Dept Environm Microbiol, S-10691 Stockholm, SwedenAlbaNova Univ Ctr, Royal Inst Technol, Dept Environm Microbiol, S-10691 Stockholm, Sweden
机构:
Beijing Forestry Univ, Beijing Key Lab Source Control Technol Water Poll, Beijing 100083, Peoples R ChinaBeijing Forestry Univ, Beijing Key Lab Source Control Technol Water Poll, Beijing 100083, Peoples R China
Chen, Sheng
Cheng, Xiang
论文数: 0引用数: 0
h-index: 0
机构:
Beijing Forestry Univ, Beijing Key Lab Source Control Technol Water Poll, Beijing 100083, Peoples R ChinaBeijing Forestry Univ, Beijing Key Lab Source Control Technol Water Poll, Beijing 100083, Peoples R China
Cheng, Xiang
Zhang, Xu
论文数: 0引用数: 0
h-index: 0
机构:
Beijing Forestry Univ, Beijing Key Lab Source Control Technol Water Poll, Beijing 100083, Peoples R ChinaBeijing Forestry Univ, Beijing Key Lab Source Control Technol Water Poll, Beijing 100083, Peoples R China
Zhang, Xu
Sun, Dezhi
论文数: 0引用数: 0
h-index: 0
机构:
Beijing Forestry Univ, Beijing Key Lab Source Control Technol Water Poll, Beijing 100083, Peoples R ChinaBeijing Forestry Univ, Beijing Key Lab Source Control Technol Water Poll, Beijing 100083, Peoples R China
机构:
Stanford Univ, Dept Microbiol & Immunol, Stanford, CA 94305 USA
Stanford Univ, Dept Med, Stanford, CA 94305 USAStanford Univ, Dept Microbiol & Immunol, Stanford, CA 94305 USA
Dethlefsen, Les
Huse, Sue
论文数: 0引用数: 0
h-index: 0
机构:
Marine Biol Lab, Josephine Bay Paul Ctr Comparat Mol Biol & Evolut, Woods Hole, MA 02543 USAStanford Univ, Dept Microbiol & Immunol, Stanford, CA 94305 USA
Huse, Sue
Sogin, Mitchell L.
论文数: 0引用数: 0
h-index: 0
机构:
Marine Biol Lab, Josephine Bay Paul Ctr Comparat Mol Biol & Evolut, Woods Hole, MA 02543 USAStanford Univ, Dept Microbiol & Immunol, Stanford, CA 94305 USA
Sogin, Mitchell L.
Relman, David A.
论文数: 0引用数: 0
h-index: 0
机构:
Stanford Univ, Dept Microbiol & Immunol, Stanford, CA 94305 USA
Stanford Univ, Dept Med, Stanford, CA 94305 USA
Vet Affairs Palo Alto Hlth Care Syst, Palo Alto, CA USAStanford Univ, Dept Microbiol & Immunol, Stanford, CA 94305 USA