Characterization and Crystal Structure of a Nonheme Diiron Monooxygenase Involved in Platensimycin and Platencin Biosynthesis

被引:21
作者
Dong, Liao-Bin [1 ]
Liu, Yu-Chen [1 ]
Cepeda, Alexis J. [1 ]
Kalkreuter, Edward [1 ]
Deng, Ming-Rong [1 ]
Rudolf, Jeffrey D. [1 ]
Chang, Changsoo [4 ,5 ]
Joachimiak, Andrzej [4 ,5 ]
Phillips, George N., Jr. [6 ]
Shen, Ben [1 ,2 ,3 ]
机构
[1] Scripps Res Inst, Dept Chem, Jupiter, FL 33458 USA
[2] Scripps Res Inst, Dept Mol Med, Jupiter, FL 33458 USA
[3] Scripps Res Inst, Nat Prod Lib Initiat, Jupiter, FL 33458 USA
[4] Argonne Natl Lab, Biosci Div, Midwest Ctr Struct Genom, 9700 S Cass Ave, Argonne, IL 60439 USA
[5] Argonne Natl Lab, Biosci Div, Struct Biol Ctr, 9700 S Cass Ave, Argonne, IL 60439 USA
[6] Rice Univ, Dept Biosci, Houston, TX 77030 USA
基金
美国国家卫生研究院;
关键词
N-OXYGENASE; AUREOTHIN; INHIBITOR; COMPLEX; FABF;
D O I
10.1021/jacs.9b06183
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Nonheme diiron monooxygenases make up a rapidly growing family of oxygenases that are rarely identified in secondary metabolism. Herein, we report the in vivo, in vitro, and structural characterizations of a nonheme diiron monooxygenase, PtmU3, that installs a C-5 beta-hydroxyl group in the unified biosynthesis of platensimycin and platencin, two highly functionalized diterpenoids that act as potent and selective inhibitors of bacterial and mammalian fatty acid synthases. This hydroxylation sets the stage for the subsequent A-ring cleavage step key to the unique diterpene-derived scaffolds of platensimycin and platencin. PtmU3 adopts an unprecedented triosephosphate isomerase (TIM) barrel structural fold for this class of enzymes and possesses a noncanonical diiron active site architecture with a saturated six-coordinate iron center lacking a mu-oxo bridge. This study reveals the first member of a previously unidentified superfamily of TIM-barrel-fold enzymes for metal-dependent dioxygen activation, with the majority predicted to act on CoA-linked substrates, thus expanding our knowledge of nature's repertoire of nonheme diiron monooxygenases and TIM-barrel-fold enzymes.
引用
收藏
页码:12406 / 12412
页数:7
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