Human CLP1 Mutations Alter tRNA Biogenesis, Affecting Both Peripheral and Central Nervous System Function

被引:158
作者
Karaca, Ender [1 ,2 ]
Weitzer, Stefan [2 ]
Pehlivan, Davut [1 ]
Shiraishi, Hiroshi [2 ]
Gogakos, Tasos [3 ]
Hanada, Toshikatsu [2 ,20 ]
Jhangiani, Shalini N. [4 ]
Wiszniewski, Wojciech [1 ]
Withers, Marjorie [1 ]
Campbell, Ian M. [1 ]
Erdin, Serkan [5 ]
Isikay, Sedat [6 ]
Franco, Luis M. [1 ,7 ]
Gonzaga-Jauregui, Claudia [1 ]
Gambin, Tomasz [1 ]
Gelowani, Violet [1 ]
Hunter, Jill V. [8 ]
Yesil, Gozde [9 ]
Koparir, Erkan [10 ]
Yilmaz, Sarenur [11 ]
Brown, Miguel [3 ]
Briskin, Daniel [3 ]
Hafner, Markus [3 ]
Morozov, Pavel [3 ]
Farazi, Thalia A. [3 ]
Bernreuther, Christian [12 ]
Glatzel, Markus [12 ]
Trattnig, Siegfried [13 ]
Friske, Joachim [13 ]
Kronnerwetter, Claudia [13 ]
Bainbridge, Matthew N. [4 ]
Gezdirici, Alper [10 ]
Seven, Mehmet [10 ]
Muzny, Donna M. [4 ]
Boerwinkle, Eric [4 ,14 ]
Ozen, Mustafa [10 ]
Clausen, Tim [15 ]
Tuschl, Thomas [3 ]
Yuksel, Adnan [10 ]
Hess, Andreas [16 ,17 ]
Gibbs, Richard A. [1 ,4 ]
Martinez, Javier [2 ]
Penninger, Josef M. [2 ]
Lupski, James R. [1 ,4 ,18 ,19 ]
机构
[1] Baylor Coll Med, Dept Human Mol Genet, Dept Mol & Human Genet, Houston, TX 77030 USA
[2] Austrian Acad Sci, Inst Mol Biotechnol IMBA, A-1030 Vienna, Austria
[3] Rockefeller Univ, Howard Hughes Med Inst, Lab RNA Mol Biol, New York, NY 10065 USA
[4] Baylor Coll Med, Human Genome Sequencing Ctr, Houston, TX 77030 USA
[5] Massachusetts Gen Hosp, Ctr Human Genet Res, Boston, MA 02114 USA
[6] Gaziantep Childrens Hosp, TR-27560 Gaziantep, Turkey
[7] Baylor Coll Med, Dept Med, Houston, TX 77030 USA
[8] Texas Childrens Hosp, Dept Pediat Radiol, Houston, TX 77030 USA
[9] Bezmialem Univ, Dept Med Genet, D-52425 Istanbul, Turkey
[10] Istanbul Univ, Cerrahpasa Med Sch, Dept Med Genet, D-52425 Istanbul, Turkey
[11] Istanbul Medeniyet Univ, Fac Med, Dept Med Genet, D-52425 Istanbul, Turkey
[12] Univ Med Ctr Hamburg Eppendorf, Inst Neuropathol, D-20246 Hamburg, Germany
[13] Med Univ Vienna, MR Ctr Excellence, Dept Radiobiol, A-1090 Vienna, Austria
[14] Univ Texas Hlth Sci Ctr Houston, Ctr Human Genet, Houston, TX 77030 USA
[15] Inst Mol Pathol, A-1030 Vienna, Austria
[16] Univ Erlangen Nurnberg, Inst Expt Pharmacol, D-91054 Erlangen, Germany
[17] Vienna BioCtr, CSF, A-1030 Vienna, Austria
[18] Baylor Coll Med, Dept Pediat, Houston, TX 77030 USA
[19] Texas Childrens Hosp, Houston, TX 77030 USA
[20] Kyoto Univ, Grad Sch Med, Med Innovat Ctr, Kyoto 6068507, Japan
关键词
CAUSE PONTOCEREBELLAR HYPOPLASIA; SYNTHETASE MUTATIONS; PROTEIN FUNCTION; GENE; DISEASE; NEUROPATHY; COMPLEX;
D O I
10.1016/j.cell.2014.02.058
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
CLP1 is a RNA kinase involved in tRNA splicing. Recently, CLP1 kinase-dead mice were shown to display a neuromuscular disorder with loss of motor neurons and muscle paralysis. Human genome analyses now identified a CLP1 homozygous missense mutation (p. R140H) in five unrelated families, leading to a loss of CLP1 interaction with the tRNA splicing endonuclease (TSEN) complex, largely reduced pretRNA cleavage activity, and accumulation of linear tRNA introns. The affected individuals develop severe motor-sensory defects, cortical dysgenesis, and microcephaly. Mice carrying kinase-dead CLP1 also displayed microcephaly and reduced cortical brain volume due to the enhanced cell death of neuronal progenitors that is associated with reduced numbers of cortical neurons. Our data elucidate a neurological syndrome defined by CLP1 mutations that impair tRNA splicing. Reduction of a founder mutation to homozygosity illustrates the importance of rare variations in disease and supports the clan genomics hypothesis.
引用
收藏
页码:636 / 650
页数:15
相关论文
共 33 条
  • [1] A method and server for predicting damaging missense mutations
    Adzhubei, Ivan A.
    Schmidt, Steffen
    Peshkin, Leonid
    Ramensky, Vasily E.
    Gerasimova, Anna
    Bork, Peer
    Kondrashov, Alexey S.
    Sunyaev, Shamil R.
    [J]. NATURE METHODS, 2010, 7 (04) : 248 - 249
  • [2] Glycyl tRNA synthetase mutations in Charcot-Marie-Tooth disease type 2D and distal spinal muscular atrophy type V
    Antonellis, A
    Ellsworth, RE
    Sambuughin, N
    Puls, I
    Abel, A
    Lee-Lin, SQ
    Jordanova, A
    Kremensky, I
    Christodoulou, K
    Middleton, LT
    Sivakumar, K
    Ionasescu, V
    Funalot, B
    Vance, JM
    Goldfarb, LG
    Fischbeck, KH
    Green, ED
    [J]. AMERICAN JOURNAL OF HUMAN GENETICS, 2003, 72 (05) : 1293 - 1299
  • [3] SNAP predicts effect of mutations on protein function
    Bromberg, Yana
    Yachdav, Guy
    Rost, Burkhard
    [J]. BIOINFORMATICS, 2008, 24 (20) : 2397 - 2398
  • [4] tRNA splicing endonuclease mutations cause pontocerebellar hypoplasia
    Budde, Birgit S.
    Namavar, Yasmin
    Barth, Peter G.
    Poll-The, Bwee Tien
    Nuernberg, Gudrun
    Becker, Christian
    van Ruissen, Fred
    Weterman, Marian A. J.
    Fluiter, Kees
    Beek, Erik T. te
    Aronica, Eleonora
    van der Knaap, Marjo S.
    Hoehne, Wolfgang
    Toliat, Mohammad Reza
    Crow, Yanick J.
    Steinlin, Maja
    Voit, Thomas
    Roelens, Filip
    Brussel, Wim
    Brockmann, Knut
    Kyllerman, Marten
    Boltshauser, Eugen
    Hammersen, Gerhard
    Willemsen, Michel
    Basel-Vanagaite, Lina
    Kraegeloh-Mann, Ingeborg
    de Vries, Linda S.
    Sztriha, Laszlo
    Muntoni, Francesco
    Ferrie, Colin D.
    Battini, Roberta
    Hennekam, Raoul C. M.
    Grillo, Eugenio
    Beemer, Frits A.
    Stoets, Loes M. E.
    Wollnik, Bernd
    Nuernberg, Peter
    Baas, Frank
    [J]. NATURE GENETICS, 2008, 40 (09) : 1113 - 1118
  • [5] Pontocerebellar hypoplasia Clinical, pathologic, and genetic studies
    Cassandrini, D.
    Biancheri, R.
    Tessa, A.
    Di Rocco, M.
    Di Capua, M.
    Bruno, C.
    Denora, P. S.
    Sartori, S.
    Rossi, A.
    Nozza, P.
    Emma, F.
    Mezzano, P.
    Politi, M. R.
    Laverda, A. M.
    Zara, F.
    Pavone, L.
    Simonati, A.
    Leuzzi, V.
    Santorelli, F. M.
    Bertini, E.
    [J]. NEUROLOGY, 2010, 75 (16) : 1459 - 1464
  • [6] Identification of deleterious mutations within three human genomes
    Chun, Sung
    Fay, Justin C.
    [J]. GENOME RESEARCH, 2009, 19 (09) : 1553 - 1561
  • [7] The human gene mutation database
    Cooper, DN
    Ball, EV
    Krawczak, M
    [J]. NUCLEIC ACIDS RESEARCH, 1998, 26 (01) : 285 - 287
  • [8] Deleterious mutation in the mitochondrial arginyl-transfer RNA synthetase gene is associated with pontocerebellar hypoplasia
    Edvardson, Simon
    Shaag, Avraham
    Kolesnikova, Olga
    Gomori, John Moshe
    Tarassov, Ivan
    Einbinder, Tom
    Saada, Ann
    Elpeleg, Orly
    [J]. AMERICAN JOURNAL OF HUMAN GENETICS, 2007, 81 (04) : 857 - 862
  • [9] Mutations in VRK1 Associated With Complex Motor and Sensory Axonal Neuropathy Plus Microcephaly
    Gonzaga-Jauregui, Claudia
    Lotze, Timothy
    Jamal, Leila
    Penney, Samantha
    Campbell, Ian M.
    Pehlivan, Davut
    Hunter, Jill V.
    Woodbury, Suzanne L.
    Raymond, Gerald
    Adesina, Adekunle M.
    Jhangiani, Shalini N.
    Reid, Jeffrey G.
    Muzny, Donna M.
    Boerwinkle, Eric
    Lupski, James R.
    Gibbs, Richard A.
    Wiszniewski, Wojciech
    [J]. JAMA NEUROLOGY, 2013, 70 (12) : 1491 - 1498
  • [10] CLP1 links tRNA metabolism to progressive motor-neuron loss
    Hanada, Toshikatsu
    Weitzer, Stefan
    Mair, Barbara
    Bernreuther, Christian
    Wainger, Brian J.
    Ichida, Justin
    Hanada, Reiko
    Orthofer, Michael
    Cronin, Shane J.
    Komnenovic, Vukoslav
    Minis, Adi
    Sato, Fuminori
    Mimata, Hiromitsu
    Yoshimura, Akihiko
    Tamir, Ido
    Rainer, Johannes
    Kofler, Reinhard
    Yaron, Avraham
    Eggan, Kevin C.
    Woolf, Clifford J.
    Glatzel, Markus
    Herbst, Ruth
    Martinez, Javier
    Penninger, Josef M.
    [J]. NATURE, 2013, 495 (7442) : 474 - 480