Structure and Epigenetic Regulation of Chromatin Fibers

被引:0
作者
Chen, Ping [1 ]
Li, Guohong [1 ]
机构
[1] Chinese Acad Sci, Natl Lab Biomacromol, CAS Ctr Excellence Biomacromol, Inst Biophys, Beijing 100101, Peoples R China
来源
CHROMOSOME SEGREGATION AND STRUCTURE, VOL 82, 2017 | 2017年 / 82卷
基金
中国国家自然科学基金;
关键词
MOLECULE FORCE SPECTROSCOPY; HIGHER-ORDER STRUCTURE; CENP-A NUCLEOSOMES; X-RAY-DIFFRACTION; CRYSTAL-STRUCTURE; IN-SITU; CENTROMERIC NUCLEOSOME; REVEALS; FACT; TRANSCRIPTION;
D O I
10.1101/sqb.2017.82.033795
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
In eukaryotes, genomic DNA is hierarchically packaged by histones into chromatin on several levels to fit inside the nucleus. As a central-level structure between nucleosomal arrays and higher-order chromatin organizations, the 30-nm chromatin fiber and its dynamics play a crucial role in gene regulation. However, despite considerable efforts over the past three decades, the fundamental structure and its dynamic regulation of chromatin fibers still remain as a big challenge in molecular biology. Here, we mainly summarize the most recent progress in elucidating the structure of the 30-nm chromatin fiber in vitro and epigenetic regulation of chromatin fibers by chromatin factors, particularly histone variants. In addition, we also discuss recent studies in unraveling the three-dimensional organization of chromatin fibers in situ by genomic approaches and electron microscopy.
引用
收藏
页码:25 / 35
页数:11
相关论文
共 88 条
[1]   THE STRUCTURE OF HISTONE-H1 AND ITS LOCATION IN CHROMATIN [J].
ALLAN, J ;
HARTMAN, PG ;
CRANEROBINSON, C ;
AVILES, FX .
NATURE, 1980, 288 (5792) :675-679
[2]   Epigenetic regulation of centromeric chromatin: old dogs, new tricks? [J].
Allshire, Robin C. ;
Karpen, Gary H. .
NATURE REVIEWS GENETICS, 2008, 9 (12) :923-937
[3]   HJURP Uses Distinct CENP-A Surfaces to Recognize and to Stabilize CENP-A/Histone H4 for Centromere Assembly [J].
Bassett, Emily A. ;
DeNizio, Jamie ;
Barnhart-Dailey, Meghan C. ;
Panchenko, Tanya ;
Sekulic, Nikolina ;
Rogers, Danielle J. ;
Foltz, Daniel R. ;
Black, Ben E. .
DEVELOPMENTAL CELL, 2012, 22 (04) :749-762
[4]   HISTONE-H1 AND HISTONE-H5 - ONE OR 2 MOLECULES PER NUCLEOSOME [J].
BATES, DL ;
THOMAS, JO .
NUCLEIC ACIDS RESEARCH, 1981, 9 (22) :5883-5894
[5]   Elucidating chromatin and nuclear domain architecture with electron spectroscopic imaging [J].
Bazett-Jones, David P. ;
Li, Ren ;
Fussner, Eden ;
Nisman, Rosa ;
Dehghani, Hesam .
CHROMOSOME RESEARCH, 2008, 16 (03) :397-412
[6]   Nucleosomes, linker DNA, and linker histone form a unique structural motif that directs the higher-order folding and compaction of chromatin [J].
Bednar, J ;
Horowitz, RA ;
Grigoryev, SA ;
Carruthers, LM ;
Hansen, JC ;
Koster, AJ ;
Woodcock, CL .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1998, 95 (24) :14173-14178
[7]   FACT facilitates transcription-dependent nucleosome alteration [J].
Belotserkovskaya, R ;
Oh, S ;
Bondarenko, VA ;
Orphanides, G ;
Studitsky, VM ;
Reinberg, D .
SCIENCE, 2003, 301 (5636) :1090-1093
[8]   Nucleosomal Elements that Control the Topography of the Barrier to Transcription [J].
Bintu, Lacramioara ;
Ishibashi, Toyotaka ;
Dangkulwanich, Manchuta ;
Wu, Yueh-Yi ;
Lubkowska, Lucyna ;
Kashlev, Mikhail ;
Bustamante, Carlos .
CELL, 2012, 151 (04) :738-749
[9]   Structural determinants for generating centromeric chromatin [J].
Black, BE ;
Foltz, DR ;
Chakravarthy, S ;
Luger, K ;
Woods, VL ;
Cleveland, DW .
NATURE, 2004, 430 (6999) :578-582
[10]   Mechanical disruption of individual nucleosomes reveals a reversible multistage release of DNA [J].
Brower-Toland, BD ;
Smith, CL ;
Yeh, RC ;
Lis, JT ;
Peterson, CL ;
Wang, MD .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2002, 99 (04) :1960-1965