Soil pH determines fungal diversity along an elevation gradient in Southwestern China

被引:85
作者
Liu, Dan [1 ,2 ]
Liu, Guohua [1 ,3 ]
Chen, Li [1 ,2 ]
Wang, Juntao [1 ]
Zhang, Limei [1 ]
机构
[1] Chinese Acad Sci, Res Ctr Ecoenvironm Sci, State Key Lab Urban & Reg Ecol, Beijing 100085, Peoples R China
[2] Univ Chinese Acad Sci, Beijing 100049, Peoples R China
[3] Joint Ctr Global Change Studies, Beijing 100875, Peoples R China
基金
中国国家自然科学基金;
关键词
fungi; diversity; elevation; soil pH; ECTOMYCORRHIZAL FUNGI; ALTITUDINAL GRADIENT; FOREST SOILS; COMMUNITY; BACTERIAL; PATTERNS; BIODIVERSITY; SEQUENCES; REVEALS; GROWTH;
D O I
10.1007/s11427-017-9200-1
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
Fungi play important roles in ecosystem processes, and the elevational pattern of fungal diversity is still unclear. Here, we examined the diversity of fungi along a 1,000 m elevation gradient on Mount Nadu, Southwestern China. We used MiSeq sequencing to obtain fungal sequences that were clustered into operational taxonomic units (OTUs) and to measure the fungal composition and diversity. Though the species richness and phylogenetic diversity of the fungal community did not exhibit significant trends with increasing altitude, they were significantly lower at mid-altitudinal sites than at the base. The Bray-Curtis distance clustering also showed that the fungal communities varied significantly with altitude. A distance-based linear model multivariate analysis (DistLM) identified that soil pH dominated the explanatory power of the species richness (23.72%), phylogenetic diversity (24.25%) and beta diversity (28.10%) of the fungal community. Moreover, the species richness and phylogenetic diversity of the fungal community increased linearly with increasing soil pH (P < 0.05). Our study provides evidence that pH is an important predictor of soil fungal diversity along elevation gradients in Southwestern China.
引用
收藏
页码:718 / 726
页数:9
相关论文
共 46 条
[31]  
2
[32]   SILVA:: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB [J].
Pruesse, Elmar ;
Quast, Christian ;
Knittel, Katrin ;
Fuchs, Bernhard M. ;
Ludwig, Wolfgang ;
Peplies, Joerg ;
Gloeckner, Frank Oliver .
NUCLEIC ACIDS RESEARCH, 2007, 35 (21) :7188-7196
[33]   New frontiers in the study of dispersal and spatial analysis of epidemics caused by species in the genus Phytophthora [J].
Ristaino, JB ;
Gumpertz, ML .
ANNUAL REVIEW OF PHYTOPATHOLOGY, 2000, 38 :541-+
[34]   CONVENIENT MODEL TO DESCRIBE THE COMBINED EFFECTS OF TEMPERATURE AND PH ON MICROBIAL-GROWTH [J].
ROSSO, L ;
LOBRY, JR ;
BAJARD, S ;
FLANDROIS, JP .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 1995, 61 (02) :610-616
[35]   Soil bacterial and fungal communities across a pH gradient in an arable soil [J].
Rousk, Johannes ;
Baath, Erland ;
Brookes, Philip C. ;
Lauber, Christian L. ;
Lozupone, Catherine ;
Caporaso, J. Gregory ;
Knight, Rob ;
Fierer, Noah .
ISME JOURNAL, 2010, 4 (10) :1340-1351
[36]  
Shen CC, 2014, ECOLOGY, V95, P3190, DOI 10.1890/14-0310.1
[37]   Abundance and Diversity of Bacterial, Archaeal, and Fungal Communities Along an Altitudinal Gradient in Alpine Forest Soils: What Are the Driving Factors? [J].
Siles, Jose A. ;
Margesin, Rosa .
MICROBIAL ECOLOGY, 2016, 72 (01) :207-220
[38]   Changes in fungal communities along a boreal forest soil fertility gradient [J].
Sterkenburg, Erica ;
Bahr, Adam ;
Durling, Mikael Brandstroem ;
Clemmensen, Karina E. ;
Lindahl, Bjoern D. .
NEW PHYTOLOGIST, 2015, 207 (04) :1145-1158
[39]   Global diversity and geography of soil fungi [J].
Tedersoo, Leho ;
Bahram, Mohammad ;
Polme, Sergei ;
Koljalg, Urmas ;
Yorou, Nourou S. ;
Wijesundera, Ravi ;
Villarreal Ruiz, Luis ;
Vasco-Palacios, Aida M. ;
Pham Quang Thu ;
Suija, Ave ;
Smith, Matthew E. ;
Sharp, Cathy ;
Saluveer, Erki ;
Saitta, Alessandro ;
Rosas, Miguel ;
Riit, Taavi ;
Ratkowsky, David ;
Pritsch, Karin ;
Poldmaa, Kadri ;
Piepenbring, Meike ;
Phosri, Cherdchai ;
Peterson, Marko ;
Parts, Kaarin ;
Paertel, Kadri ;
Otsing, Eveli ;
Nouhra, Eduardo ;
Njouonkou, Andre L. ;
Nilsson, R. Henrik ;
Morgado, Luis N. ;
Mayor, Jordan ;
May, Tom W. ;
Majuakim, Luiza ;
Lodge, D. Jean ;
Lee, Su See ;
Larsson, Karl-Henrik ;
Kohout, Petr ;
Hosaka, Kentaro ;
Hiiesalu, Indrek ;
Henkel, Terry W. ;
Harend, Helery ;
Guo, Liang-dong ;
Greslebin, Alina ;
Grelet, Gwen ;
Geml, Jozsef ;
Gates, Genevieve ;
Dunstan, William ;
Dunk, Chris ;
Drenkhan, Rein ;
Dearnaley, John ;
De Kesel, Andre .
SCIENCE, 2014, 346 (6213) :1078-+
[40]   The effect of storage on microbial activity and bacterial community structure of drained and flooded paddy soil [J].
Wang, Juan ;
Chapman, Stephen J. ;
Yao, Huaiying .
JOURNAL OF SOILS AND SEDIMENTS, 2015, 15 (04) :880-889