StarDOM: From STAR format to XML

被引:1
作者
Linge, JP [1 ]
Nilges, M [1 ]
Ehrlich, L [1 ]
机构
[1] European Mol Biol Lab, D-69012 Heidelberg, Germany
关键词
BioMagResBank; document object model; mmCIF; STAR; XML;
D O I
10.1023/A:1008347330165
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
StarDOM is a software package for the representation of STAR files as document object models and the conversion of STAR files into XML. This allows interactive navigation by using the Document Object Model representation of the data as well as easy access by XML query languages. As an example application, the entire BioMagResBank has been transformed into XML format. Using an XML query language, statistical queries on the collected NMR data sets can be constructed with very little effort. The BioMagResBank/XML data and the software can be obtained at http://www.nmr.embl-heidelberg.de/nmr/StarDOM/.
引用
收藏
页码:169 / 172
页数:4
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