Parkinson's disease age at onset genome-wide association study: Defining heritability, genetic loci, and α-synuclein mechanisms

被引:248
作者
Blauwendraat, Cornelis [1 ,2 ]
Heilbron, Karl [3 ]
Vallerga, Costanza L. [4 ]
Bandres-Ciga, Sara [1 ]
von Coelln, Rainer [5 ]
Pihlstrom, Lasse [6 ]
Simon-Sanchez, Javier [7 ,8 ]
Schulte, Claudia [7 ,8 ]
Sharma, Manu [9 ]
Krohn, Lynne [10 ,11 ]
Siitonen, Ari [12 ,13 ,14 ]
Iwaki, Hirotaka [15 ]
Leonard, Hampton [1 ]
Noyce, Alastair J. [16 ,17 ]
Tan, Manuela [17 ]
Gibbs, J. Raphael [1 ]
Hernandez, Dena G. [1 ]
Scholz, Sonja W. [2 ]
Jankovic, Joseph [18 ,19 ]
Shulman, Lisa M. [5 ]
Lesage, Suzanne [20 ]
Corvol, Jean-Christophe [20 ]
Brice, Alexis [20 ]
van Hilten, Jacobus J. [21 ]
Marinus, Johan [21 ]
Eerola-Rautio, Johanna [22 ,23 ]
Tienari, Pentti [22 ,23 ]
Majamaa, Kari [12 ,13 ,14 ]
Toft, Mathias [6 ,24 ]
Grosset, Donald G. [25 ,26 ]
Gasser, Thomas [7 ,8 ]
Heutink, Peter [7 ,8 ]
Shulman, Joshua M. [18 ,19 ,27 ,28 ,29 ]
Wood, Nicolas [17 ]
Hardy, John [30 ]
Morris, Huw R. [17 ]
Hinds, David A. [3 ]
Gratten, Jacob [4 ,31 ]
Visscher, Peter M. [4 ,32 ]
Gan-Or, Ziv [10 ,11 ,33 ]
Nalls, Mike A. [1 ,34 ]
Singleton, Andrew B. [1 ]
机构
[1] NIA, Lab Neurogenet, NIH, Bldg 35,35 Convent Dr, Bethesda, MD 20892 USA
[2] NINDS, Neurodegenerat Dis Res Unit, NIH, Bldg 36,Rm 4D04, Bethesda, MD 20892 USA
[3] 23andMe Inc, Mountain View, CA USA
[4] Univ Queensland, Inst Mol Biosci, Brisbane, Qld, Australia
[5] Univ Maryland, Sch Med, Dept Neurol, Baltimore, MD 21201 USA
[6] Oslo Univ Hosp, Dept Neurol, Oslo, Norway
[7] Univ Tubingen, Hertie Inst Clin Brain Res, Dept Neurodegenerat Dis, Tubingen, Germany
[8] German Ctr Neurodegenerat Dis DZNE, Tubingen, Germany
[9] Univ Tubingen, Inst Clin Epidemiol & Appl Biometry, Ctr Genet Epidemiol, Tubingen, Germany
[10] McGill Univ, Dept Human Genet, Montreal, PQ, Canada
[11] McGill Univ, Montreal Neurol Inst, Montreal, PQ, Canada
[12] Univ Oulu, Dept Neurol, Inst Clin Med, Oulu, Finland
[13] Oulu Univ Hosp, Dept Neurol, Oulu, Finland
[14] Oulu Univ Hosp, Med Res Ctr, Oulu, Finland
[15] Michael J Fox Fdn Parkinsons Res, New York, NY USA
[16] Queen Mary Univ London, Wolfson Inst Prevent Med, Prevent Neurol Unit, London, England
[17] UCL Queen Sq Inst Neurol, Dept Clin & Movement Neurosci, London, England
[18] Baylor Coll Med, Dept Neurol, Parkinsons Dis Ctr, Houston, TX 77030 USA
[19] Baylor Coll Med, Dept Neurol, Movement Disorders Clin, Houston, TX 77030 USA
[20] UPMC Univ Paris 06, Sorbonne Univ, INSERM,ICM, U1127,UMR S1127,Inst Cerveau & Moelle Epiniere, Paris, France
[21] Leiden Univ, Med Ctr, Dept Neurol, Leiden, Netherlands
[22] Univ Helsinki, Helsinki Univ Hosp, Dept Neurol, Helsinki, Finland
[23] Univ Helsinki, Biomedicum, Res Programs Unit, Mol Neurol, Helsinki, Finland
[24] Univ Oslo, Inst Clin Med, Oslo, Norway
[25] Queen Elizabeth Univ Hosp, Inst Neurol Sci, Dept Neurol, Glasgow, Lanark, Scotland
[26] Univ Glasgow, Inst Neurosci Psychol, Glasgow, Lanark, Scotland
[27] Baylor Coll Med, Dept Mol & Human Genet, Houston, TX 77030 USA
[28] Baylor Coll Med, Dept Neurosci, Houston, TX 77030 USA
[29] Texas Childrens Hosp, Jan & Dan Duncan Neurol Res Inst, Houston, TX 77030 USA
[30] UCL Queen Sq Inst Neurol, Dept Neurodegenerat Dis, London, England
[31] Mater Res, Translat Res Inst, Brisbane, Qld, Australia
[32] Univ Queensland, Queensland Brain Inst, Brisbane, Qld, Australia
[33] McGill Univ, Dept Neurol & Neurosurg, Montreal, PQ, Canada
[34] Data Tecn Int, Glen Echo, MD USA
基金
英国惠康基金; 美国国家卫生研究院; 英国医学研究理事会;
关键词
age at onset; GBA; Parkinson's disease; SNCA; TMEM175; STATISTICAL POWER; GBA MUTATIONS; RISK LOCI; GLUCOCEREBROSIDASE; METAANALYSIS; APOE; PENETRANCE; EXPRESSION; LONGEVITY; EFFICIENT;
D O I
10.1002/mds.27659
中图分类号
R74 [神经病学与精神病学];
学科分类号
摘要
Background Increasing evidence supports an extensive and complex genetic contribution to PD. Previous genome-wide association studies (GWAS) have shed light on the genetic basis of risk for this disease. However, the genetic determinants of PD age at onset are largely unknown. Objectives To identify the genetic determinants of PD age at onset. Methods Using genetic data of 28,568 PD cases, we performed a genome-wide association study based on PD age at onset. Results We estimated that the heritability of PD age at onset attributed to common genetic variation was similar to 0.11, lower than the overall heritability of risk for PD (similar to 0.27), likely, in part, because of the subjective nature of this measure. We found two genome-wide significant association signals, one at SNCA and the other a protein-coding variant in TMEM175, both of which are known PD risk loci and a Bonferroni-corrected significant effect at other known PD risk loci, GBA, INPP5F/BAG3, FAM47E/SCARB2, and MCCC1. Notably, SNCA, TMEM175, SCARB2, BAG3, and GBA have all been shown to be implicated in alpha-synuclein aggregation pathways. Remarkably, other well-established PD risk loci, such as GCH1 and MAPT, did not show a significant effect on age at onset of PD. Conclusions Overall, we have performed the largest age at onset of PD genome-wide association studies to date, and our results show that not all PD risk loci influence age at onset with significant differences between risk alleles for age at onset. This provides a compelling picture, both within the context of functional characterization of disease-linked genetic variability and in defining differences between risk alleles for age at onset, or frank risk for disease. (c) 2019 International Parkinson and Movement Disorder Society
引用
收藏
页码:866 / 875
页数:10
相关论文
共 56 条
[1]   Incidence of Parkinson's disease in Norway: the Norwegian ParkWest study [J].
Alves, G. ;
Mueller, B. ;
Herlofson, K. ;
HogenEsch, I. ;
Telstad, W. ;
Aarsland, D. ;
Tysnes, O-B ;
Larsen, J. P. .
JOURNAL OF NEUROLOGY NEUROSURGERY AND PSYCHIATRY, 2009, 80 (08) :851-857
[2]   Glucocerebrosidase depletion enhances cell-to-cell transmission of α-synuclein [J].
Bae, Eun-Jin ;
Yang, Na-Young ;
Song, Miyoung ;
Lee, Cheol Soon ;
Lee, Jun Sung ;
Jung, Byung Chul ;
Lee, He-Jin ;
Kim, Seokjoong ;
Masliah, Eliezer ;
Sardi, Sergio Pablo ;
Lee, Seung-Jae .
NATURE COMMUNICATIONS, 2014, 5
[3]   Calculating statistical power in Mendelian randomization studies [J].
Brion, Marie-Jo A. ;
Shakhbazov, Konstantin ;
Visscher, Peter M. .
INTERNATIONAL JOURNAL OF EPIDEMIOLOGY, 2013, 42 (05) :1497-1501
[4]   SNCA: Major genetic modifier of age at onset of Parkinson's disease [J].
Brockmann, Kathrin ;
Schulte, Claudia ;
Hauser, Ann-Kathrin ;
Lichtner, Peter ;
Huber, Heiko ;
Maetzler, Walter ;
Berg, Daniela ;
Gasser, Thomas .
MOVEMENT DISORDERS, 2013, 28 (09) :1217-1221
[5]   GWAS of Longevity in CHARGE Consortium Confirms APOE and FOXO3 Candidacy [J].
Broer, Linda ;
Buchman, Aron S. ;
Deelen, Joris ;
Evans, Daniel S. ;
Faul, Jessica D. ;
Lunetta, Kathryn L. ;
Sebastiani, Paola ;
Smith, Jennifer A. ;
Smith, Albert V. ;
Tanaka, Toshiko ;
Yu, Lei ;
Arnold, Alice M. ;
Aspelund, Thor ;
Benjamin, Emelia J. ;
De Jager, Philip L. ;
Eirkisdottir, Gudny ;
Evans, Denis A. ;
Garcia, Melissa E. ;
Hofman, Albert ;
Kaplan, Robert C. ;
Kardia, Sharon L. R. ;
Kiel, Douglas P. ;
Oostra, Ben A. ;
Orwoll, Eric S. ;
Parimi, Neeta ;
Psaty, Bruce M. ;
Rivadeneira, Fernando ;
Rotter, Jerome I. ;
Seshadri, Sudha ;
Singleton, Andrew ;
Tiemeier, Henning ;
Uitterlinden, Andre G. ;
Zhao, Wei ;
Bandinelli, Stefania ;
Bennett, David A. ;
Ferrucci, Luigi ;
Gudnason, Vilmundur ;
Harris, Tamara B. ;
Karasik, David ;
Launer, Lenore J. ;
Perls, Thomas T. ;
Slagboom, P. Eline ;
Tranah, Gregory J. ;
Weir, David R. ;
Newman, Anne B. ;
van Duijn, Cornelia M. ;
Murabito, Joanne M. .
JOURNALS OF GERONTOLOGY SERIES A-BIOLOGICAL SCIENCES AND MEDICAL SCIENCES, 2015, 70 (01) :110-118
[6]   LD Score regression distinguishes confounding from polygenicity in genome-wide association studies [J].
Bulik-Sullivan, Brendan K. ;
Loh, Po-Ru ;
Finucane, Hilary K. ;
Ripke, Stephan ;
Yang, Jian ;
Patterson, Nick ;
Daly, Mark J. ;
Price, Alkes L. ;
Neale, Benjamin M. .
NATURE GENETICS, 2015, 47 (03) :291-+
[7]   A role of BAG3 in regulating SNCA/α-synuclein clearance via selective macroautophagy [J].
Cao, Yu-Lan ;
Yang, Ya-Ping ;
Mao, Cheng-Jie ;
Zhang, Xiao-Qi ;
Wang, Chen-Tao ;
Yang, Jing ;
Lv, Dong-Jun ;
Wang, Fen ;
Hu, Li-Fang ;
Liu, Chun-Feng .
NEUROBIOLOGY OF AGING, 2017, 60 :104-115
[8]   A meta-analysis of genome-wide association studies identifies 17 new Parkinson's disease risk loci [J].
Chang, Diana ;
Nalls, Mike A. ;
Hallgrimsdottir, Ingileif B. ;
Hunkapiller, Julie ;
van der Brug, Marcel ;
Cai, Fang ;
Kerchner, Geoffrey A. ;
Ayalon, Gai ;
Bingol, Baris ;
Sheng, Morgan ;
Hinds, David ;
Behrens, Timothy W. ;
Singleton, Andrew B. ;
Bhangale, Tushar R. ;
Graham, Robert R. .
NATURE GENETICS, 2017, 49 (10) :1511-+
[9]   Variants in GBA, SNCA, and MAPT influence Parkinson disease risk, age at onset, and progression [J].
Davis, Albert A. ;
Andruska, Kristin M. ;
Benitez, Bruno A. ;
Racette, Brad A. ;
Perlmutter, Joel S. ;
Cruchaga, Carlos .
NEUROBIOLOGY OF AGING, 2016, 37 :209.e1-209.e7
[10]   Virtual research visits and direct-to-consumer genetic testing in Parkinson's disease [J].
Dorsey, E. Ray ;
Darwin, Kristin C. ;
Mohammed, Samara ;
Donohue, Sean ;
Tethal, Alyssa ;
Achey, Meredith A. ;
Ward, Susan ;
Caughey, Elaine ;
Conley, Emily D. ;
Eriksson, Nicholas ;
Ravina, Bernard .
DIGITAL HEALTH, 2015, 1