Investigation of circulating lncRNAs in B-cell neoplasms

被引:142
作者
Isin, Mustafa [1 ]
Ozgur, Emre [1 ]
Cetin, Guven [2 ]
Erten, Nilgun [3 ]
Aktan, Melih [4 ]
Gezer, Ugur [1 ]
Dalay, Nejat [1 ]
机构
[1] Istanbul Univ, Inst Oncol, Dept Basic Oncol, TR-34093 Istanbul, Turkey
[2] Bezmialem Vakif Gureba Univ, Fac Med, Dept Hematol, Istanbul, Turkey
[3] Istanbul Univ, Istanbul Fac Med, Dept Internal Med, TR-34093 Istanbul, Turkey
[4] Istanbul Univ, Istanbul Fac Med, Dept Hematol, TR-34093 Istanbul, Turkey
关键词
lncRNA; Cell-free RNA; Chronic lymphocytic leukemia; Multiple myeloma; LONG NONCODING RNA; GROWTH-ARREST; POOR-PROGNOSIS; GENE; HOTAIR; CANCER; GAS5; INHIBITION; EXPRESSION; EVOLUTION;
D O I
10.1016/j.cca.2014.02.010
中图分类号
R446 [实验室诊断]; R-33 [实验医学、医学实验];
学科分类号
1001 ;
摘要
Long non-coding RNAs (lncRNA) which are longer than 200 base pairs in length, play an important role in cellular machinery. Chronic lymphocytic leukemia (CLL) and multiple myeloma (MM) are neoplasms of B-cells. In our study we aimed to investigate circulating lncRNA levels of CLL and MM patients. For this purpose we selected 5 candidate lncRNAs (TUG1, LincRNA-p21, MALAT1, HOTAIR, and GAS5) where the first two are regulated by p53. Analyses were performed by real-time PCR using cDNA synthesized from plasma RNAs. In both disease groups differential levels of plasma lncRNAs were observed. LincRNA-p21 was the only molecule displaying significant changes in the CLL group while all remaining lncRNAs showed significant differences in the MM group. In the MM group only TUG1 showed higher levels than the healthy volunteers. In conclusion, the expression levels of the candidate lncRNA molecules display a general trend for tissue- and disease-specific expression which can provide important potential biomarkers specific to the particular disease type. However, further studies are necessary to elucidate their involvement in disease development and progression. (C) 2014 Elsevier B.V. All rights reserved.
引用
收藏
页码:255 / 259
页数:5
相关论文
共 49 条
[1]   A long nuclear-retained non-coding RNA regulates synaptogenesis by modulating gene expression [J].
Bernard, Delphine ;
Prasanth, Kannanganattu V. ;
Tripathi, Vidisha ;
Colasse, Sabrina ;
Nakamura, Tetsuya ;
Xuan, Zhenyu ;
Zhang, Michael Q. ;
Sedel, Frederic ;
Jourdren, Laurent ;
Coulpier, Fanny ;
Triller, Antoine ;
Spector, David L. ;
Bessis, Alain .
EMBO JOURNAL, 2010, 29 (18) :3082-3093
[2]   The GENCODE v7 catalog of human long noncoding RNAs: Analysis of their gene structure, evolution, and expression [J].
Derrien, Thomas ;
Johnson, Rory ;
Bussotti, Giovanni ;
Tanzer, Andrea ;
Djebali, Sarah ;
Tilgner, Hagen ;
Guernec, Gregory ;
Martin, David ;
Merkel, Angelika ;
Knowles, David G. ;
Lagarde, Julien ;
Veeravalli, Lavanya ;
Ruan, Xiaoan ;
Ruan, Yijun ;
Lassmann, Timo ;
Carninci, Piero ;
Brown, James B. ;
Lipovich, Leonard ;
Gonzalez, Jose M. ;
Thomas, Mark ;
Davis, Carrie A. ;
Shiekhattar, Ramin ;
Gingeras, Thomas R. ;
Hubbard, Tim J. ;
Notredame, Cedric ;
Harrow, Jennifer ;
Guigo, Roderic .
GENOME RESEARCH, 2012, 22 (09) :1775-1789
[3]   The small-nucleolar RNAs commonly used for microRNA normalisation correlate with tumour pathology and prognosis [J].
Gee, H. E. ;
Buffa, F. M. ;
Camps, C. ;
Ramachandran, A. ;
Leek, R. ;
Taylor, M. ;
Patil, M. ;
Sheldon, H. ;
Betts, G. ;
Homer, J. ;
West, C. ;
Ragoussis, J. ;
Harris, A. L. .
BRITISH JOURNAL OF CANCER, 2011, 104 (07) :1168-1177
[4]   Large Intervening Non-coding RNA HOTAIR is Associated with Hepatocellular Carcinoma Progression [J].
Geng, Y. J. ;
Xie, S. L. ;
Li, Q. ;
Ma, J. ;
Wang, G. Y. .
JOURNAL OF INTERNATIONAL MEDICAL RESEARCH, 2011, 39 (06) :2119-2128
[5]   Human Cancer Long Non-Coding RNA Transcriptomes [J].
Gibb, Ewan A. ;
Vucic, Emily A. ;
Enfield, Katey S. S. ;
Stewart, Greg L. ;
Lonergan, Kim M. ;
Kennett, Jennifer Y. ;
Becker-Santos, Daiana D. ;
MacAulay, Calum E. ;
Lam, Stephen ;
Brown, Carolyn J. ;
Lam, Wan L. .
PLOS ONE, 2011, 6 (10)
[6]   Long non-coding RNA HOTAIR reprograms chromatin state to promote cancer metastasis [J].
Gupta, Rajnish A. ;
Shah, Nilay ;
Wang, Kevin C. ;
Kim, Jeewon ;
Horlings, Hugo M. ;
Wong, David J. ;
Tsai, Miao-Chih ;
Hung, Tiffany ;
Argani, Pedram ;
Rinn, John L. ;
Wang, Yulei ;
Brzoska, Pius ;
Kong, Benjamin ;
Li, Rui ;
West, Robert B. ;
van de Vijver, Marc J. ;
Sukumar, Saraswati ;
Chang, Howard Y. .
NATURE, 2010, 464 (7291) :1071-U148
[7]   The hallmarks of cancer A long non-coding RNA point of view [J].
Gutschner, Tony ;
Diederichs, Sven .
RNA BIOLOGY, 2012, 9 (06) :703-719
[8]   Segregation of RNA and separate packaging of DNA and RNA in apoptotic bodies during apoptosis [J].
Halicka, HD ;
Bedner, E ;
Darzynkiewicz, Z .
EXPERIMENTAL CELL RESEARCH, 2000, 260 (02) :248-256
[9]   Long intergenic non-coding RNA TUG1 is overexpressed in urothelial carcinoma of the bladder [J].
Han, Yonghua ;
Liu, Yuchen ;
Gui, Yaoting ;
Cai, Zhiming .
JOURNAL OF SURGICAL ONCOLOGY, 2013, 107 (05) :555-559
[10]   miR-1-Mediated Induction of Cardiogenesis in Mesenchymal Stem Cells via Downregulation of Hes-1 [J].
Huang, Feng ;
Tang, Liang ;
Fang, Zhen-fei ;
Hu, Xin-qun ;
Pan, Jia-yi ;
Zhou, Sheng-hua .
BIOMED RESEARCH INTERNATIONAL, 2013, 2013