Draft Genome Sequences of Bacillaceae Strains Isolated from the International Space Station

被引：5

作者：

Daudu, Robert ^{[1
]}

Singh, Nitin K. ^{[1
]}

Wood, Jason M. ^{[1
]}

Debieu, Marilyne ^{[2
]}

O'Hara, Niamh B. ^{[2
,3
]}

Mason, Christopher E. ^{[4
,5
]}

Venkateswarana, Kasthuri ^{[1
]}

机构：

[1] CALTECH, Jet Prop Lab, Pasadena, CA 91125 USA

[2] Biotia, New York, NY USA

[3] SUNY Downstate Hlth Sci Univ, Coll Med, Dept Cell Biol, Brooklyn, NY USA

[4] Weill Cornell Med, Dept Physiol & Biophys, New York, NY USA

[5] Weill Cornell Med, WorldQuant Initiat Quantitat Predict, New York, NY USA

来源：

MICROBIOLOGY RESOURCE ANNOUNCEMENTS | 2020年 / 9卷 / 44期

关键词：

D O I：

10.1128/MRA.00701-20

中图分类号：

Q93 [微生物学];

学科分类号：

071005 ; 100705 ;

摘要：

The draft genome sequences of 29 bacterial isolates belonging to the family Bacillaceae were collected from the International Space Station, assembled, and identified. Further analysis of these sequences will enable us to understand their roles for space and biotechnological applications.

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页数：3

相关论文

共 12 条

[1]

Andrews S., 2015, FASTQC QUALITY TOOL

[2] SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing [J].

Bankevich, Anton ;

Nurk, Sergey ;

Antipov, Dmitry ;

Gurevich, Alexey A. ;

Dvorkin, Mikhail ;

Kulikov, Alexander S. ;

Lesin, Valery M. ;

Nikolenko, Sergey I. ;

Son Pham ;

Prjibelski, Andrey D. ;

Pyshkin, Alexey V. ;

Sirotkin, Alexander V. ;

Vyahhi, Nikolay ;

Tesler, Glenn ;

Alekseyev, Max A. ;

Pevzner, Pavel A. .

JOURNAL OF COMPUTATIONAL BIOLOGY, 2012, 19 (05) :455-477

[3] Life from the ashes: survival of dry bacterial spores after very high temperature exposure [J].

Beladjal, Lynda ;

Gheysens, Tom ;

Clegg, James S. ;

Amar, Mohamed ;

Mertens, Johan .

EXTREMOPHILES, 2018, 22 (05) :751-759

[4] fastp: an ultra-fast all-in-one FASTQ preprocessor [J].

Chen, Shifu ;

Zhou, Yanqing ;

Chen, Yaru ;

Gu, Jia .

BIOINFORMATICS, 2018, 34 (17) :884-890

[5] The Prevalence and Control of Bacillus and Related Spore-Forming Bacteria in the Dairy Industry [J].

Gopal, Nidhi ;

Hill, Colin ;

Ross, Paul R. ;

Beresford, Tom P. ;

Fenelon, Mark A. ;

Cotter, Paul D. .

FRONTIERS IN MICROBIOLOGY, 2015, 6

[6] QUAST: quality assessment tool for genome assemblies [J].

Gurevich, Alexey ;

Saveliev, Vladislav ;

Vyahhi, Nikolay ;

Tesler, Glenn .

BIOINFORMATICS, 2013, 29 (08) :1072-1075

[7] Resistance of Bacterial Endospores to Outer Space for Planetary Protection Purposes-Experiment PROTECT of the EXPOSE-E Mission [J].

Horneck, Gerda ;

Moeller, Ralf ;

Cadet, Jean ;

Douki, Thierry ;

Mancinelli, Rocco L. ;

Nicholson, Wayne L. ;

Panitz, Corinna ;

Rabbow, Elke ;

Rettberg, Petra ;

Spry, Andrew ;

Stackebrandt, Erko ;

Vaishampayan, Parag ;

Venkateswaran, Kasthuri J. .

ASTROBIOLOGY, 2012, 12 (05) :445-+

[8] Ecology of Bacillaceae [J].

Mandic-Mulec, Ines ;

Stefanic, Polonca ;

van Elsas, Jan Dirk .

MICROBIOLOGY SPECTRUM, 2015, 3 (02)

[9] Characterization of the total and viable bacterial and fungal communities associated with the International Space Station surfaces [J].

Sielaff, Aleksandra Checinska ;

Urbaniak, Camilla ;

Mohan, Ganesh Babu Malli ;

Stepanov, Victor G. ;

Quyen Tran ;

Wood, Jason M. ;

Minich, Jeremiah ;

McDonald, Daniel ;

Mayer, Teresa ;

Knight, Rob ;

Karouia, Fathi ;

Fox, George E. ;

Venkateswaran, Kasthuri .

MICROBIOME, 2019, 7 (1)

[10] Multi-drug resistant Enterobacter bugandensis species isolated from the International Space Station and comparative genomic analyses with human pathogenic strains [J].

Singh, Nitin K. ;

Bezdan, Daniela ;

Sielaff, Aleksandra Checinska ;

Wheeler, Kevin ;

Mason, Christopher E. ;

Venkateswaran, Kasthuri .

BMC MICROBIOLOGY, 2018, 18