Logic Calculation Based on Two-Domain DNA Strand Displacement

被引:2
|
作者
Wang, Xiaobiao [1 ]
Zhou, Changjun [1 ]
Zheng, Xuedong [1 ]
Zhang, Qiang [1 ]
机构
[1] Dalian Univ, Minist Educ, Key Lab Adv Design & Intelligent Comp, Dalian 116622, Peoples R China
来源
ADVANCES IN NEURAL NETWORKS, PT I | 2017年 / 10261卷
基金
中国国家自然科学基金;
关键词
DNA strand displacement; Logic gate; Calculation model; COMPUTING MODEL; COMPUTATION;
D O I
10.1007/978-3-319-59072-1_20
中图分类号
TP18 [人工智能理论];
学科分类号
081104 ; 0812 ; 0835 ; 1405 ;
摘要
DNA strand displacement technology has become one of the most commonly used in biological computing technology. In this paper, we design a calculation model of the basic logic unit based on two-domain DNA strand displacement and logical relation, including AND, OR logic gates. The calculation process is simple and easy to understand, because of the unified single strand structure. The process of the reaction is more thorough and more easy to control. The model is used to construct a converter of a four-bit binary into BCD code. The whole reaction process can be programmed and simulated in the software Visual DSD, and the result also verifies the correctness of the design of the basic logic calculation model.
引用
收藏
页码:161 / 169
页数:9
相关论文
共 50 条
  • [1] Logic Operation Model of the Complementer Based on Two-domain DNA Strand Displacement
    Xie, Wendan
    Zhou, Changjun
    Lv, Hui
    Zhang, Qiang
    FUNDAMENTA INFORMATICAE, 2019, 164 (2-3) : 277 - 288
  • [2] Logic Gates Designed with Domain Label Based on DNA Strand Displacement
    Yang, Qianhao
    Zhou, Changjun
    Zhang, Qiang
    ADVANCES IN SWARM INTELLIGENCE, ICSI 2016, PT I, 2016, 9712 : 244 - 255
  • [3] A DNA Logic Model Based on DNA Strand Displacement
    Wang, Zicheng
    Ai, Jian
    Wang, Yanfeng
    Cui, Guangzhao
    JOURNAL OF NANOELECTRONICS AND OPTOELECTRONICS, 2017, 12 (12) : 1343 - 1349
  • [4] Molecular Logic Gate Based on DNA Strand Displacement Reaction
    Ma, Jingjing
    JOURNAL OF NANOELECTRONICS AND OPTOELECTRONICS, 2021, 16 (06) : 974 - 977
  • [5] Simple Logic Computation Based on the DNA Strand Displacement
    Wang, Yanfeng
    Tian, Guihua
    Hou, Hewei
    Ye, Mengmeng
    Cui, Guangzhao
    JOURNAL OF COMPUTATIONAL AND THEORETICAL NANOSCIENCE, 2014, 11 (09) : 1975 - 1982
  • [6] Logic Gates Based on Circular DNA Strand Displacement and a Fluorescent Agent
    Liu, Fangfang
    Wang, Yanchai
    Li, Minghui
    Chen, Xiangxiang
    Dong, Yafei
    BIO-INSPIRED COMPUTING - THEORIES AND APPLICATIONS, BIC-TA 2015, 2015, 562 : 260 - 267
  • [7] Massively Parallel DNA Computing Based on Domino DNA Strand Displacement Logic Gates
    Chen, Xin
    Liu, Xinyu
    Wang, Fang
    Li, Sirui
    Chen, Congzhou
    Qiang, Xiaoli
    Shi, Xiaolong
    ACS SYNTHETIC BIOLOGY, 2022, 11 (07): : 2504 - 2512
  • [8] DNA Logic Multiplexing Using Toehold-Mediated Strand Displacement
    Chen, Congzhou
    Wang, Hongyu
    Zhu, Enqiang
    Shi, Xiaolong
    Xu, Jin
    IEEE ACCESS, 2020, 8 (08): : 88108 - 88114
  • [9] Metal-Mediated Logic Computing Model with DNA Strand Displacement
    Song, Ming
    Wang, Yanchai
    Li, Minghui
    Dong, Yafei
    JOURNAL OF COMPUTATIONAL AND THEORETICAL NANOSCIENCE, 2015, 12 (09) : 2318 - 2321
  • [10] DNA strand displacement system running logic programs
    Rodriguez-Paton, Alfonso
    Sainz de Murieta, Inaki
    Sosik, Petr
    BIOSYSTEMS, 2014, 115 : 5 - 12