Spatial structure arising from neighbour-dependent bias in collective cell movement

被引:19
作者
Binny, Rachelle N. [1 ,2 ,6 ]
Haridas, Parvathi [3 ]
James, Alex [1 ,2 ]
Law, Richard [4 ]
Simpson, Matthew J. [3 ,5 ]
Plank, Michael J. [1 ,2 ]
机构
[1] Univ Canterbury, Sch Math & Stat, Christchurch 1, New Zealand
[2] Te Putmaha Matatini, Auckland, New Zealand
[3] Queensland Univ Technol, Inst Hlth & Biomed Innovat, Brisbane, Qld 4001, Australia
[4] Univ York, Ron Cooke Hub, York Ctr Complex Syst Anal, York YO10 5DD, N Yorkshire, England
[5] Queensland Univ Technol, Sch Math Sci, Brisbane, Qld 4001, Australia
[6] Landcare Res Manaaki Whenua, Lincoln, New Zealand
关键词
Collective movement; Cell migration; Spatial moment dynamics; Directed movement; Spatial correlations; Individual-based model; MOMENT DYNAMICS; MIGRATION; INVASION; GROWTH; PROLIFERATION; MECHANISMS; EQUATIONS; FRAMEWORK; MOTILITY; GUIDANCE;
D O I
10.7717/peerj.1689
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Mathematical models of collective cell movement often neglect the effects of spatial structure, such as clustering, on the population dynamics. Typically, they assume that individuals interact with one another in proportion to their average density (the mean-field assumption) which means that cell - cell interactions occurring over short spatial ranges are not accounted for. However, in vitro cell culture studies have shown that spatial correlations can play an important role in determining collective behaviour. Here, we take a combined experimental and modelling approach to explore how individual-level interactions give rise to spatial structure in a moving cell population. Using imaging data from in vitro experiments, we quantify the extent of spatial structure in a population of 3T3 fibroblast cells. To understand how this spatial structure arises, we develop a lattice-free individual-based model (IBM) and simulate cell movement in two spatial dimensions. Our model allows an individual's direction of movement to be affected by interactions with other cells in its neighbourhood, providing insights into how directional bias generates spatial structure. We consider how this behaviour scales up to the population level by using the IBM to derive a continuum description in terms of the dynamics of spatial moments. In particular, we account for spatial correlations between cells by considering dynamics of the second spatial moment (the average density of pairs of cells). Our numerical results suggest that the moment dynamics description can provide a good approximation to averaged simulation results from the underlying IBM. Using our in vitro data, we estimate parameters for the model and show that it can generate similar spatial structure to that observed in a 3T3 fibroblast cell population.
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页数:24
相关论文
共 58 条
[1]   CONTACT INHIBITION AND MALIGNANCY [J].
ABERCROMBIE, M .
NATURE, 1979, 281 (5729) :259-262
[2]   On the growth of locally interacting plants: differential equations for the dynamics of spatial moments [J].
Adams, Thomas P. ;
Holland, E. Penelope ;
Law, Richard ;
Plank, Michael J. ;
Raghib, Michael .
ECOLOGY, 2013, 94 (12) :2732-2743
[3]   Distinguishing between mechanisms of cell aggregation using pair-correlation functions [J].
Agnew, D. J. G. ;
Green, J. E. F. ;
Brown, T. M. ;
Simpson, M. J. ;
Binder, B. J. .
JOURNAL OF THEORETICAL BIOLOGY, 2014, 352 :16-23
[4]   Continuous and discrete mathematical models of tumor-induced angiogenesis [J].
Anderson, ARA ;
Chaplain, MAJ .
BULLETIN OF MATHEMATICAL BIOLOGY, 1998, 60 (05) :857-899
[5]  
[Anonymous], 1937, B MOSCOW U MATH MECH
[6]  
[Anonymous], 2008, Statistical Analysis and Modelling of Spatial Point Patterns
[7]   Spectral analysis of pair-correlation bandwidth: application to cell biology images [J].
Binder, Benjamin J. ;
Simpson, Matthew J. .
ROYAL SOCIETY OPEN SCIENCE, 2015, 2 (02)
[8]   Spatial moment dynamics for collective cell movement incorporating a neighbour-dependent directional bias [J].
Binny, Rachelle N. ;
Plank, Michael J. ;
James, Alex .
JOURNAL OF THE ROYAL SOCIETY INTERFACE, 2015, 12 (106)
[9]   Using moment equations to understand stochastically driven spatial pattern formation in ecological systems [J].
Bolker, B ;
Pacala, SW .
THEORETICAL POPULATION BIOLOGY, 1997, 52 (03) :179-197
[10]   Excluded-volume effects in the diffusion of hard spheres [J].
Bruna, Maria ;
Chapman, S. Jonathan .
PHYSICAL REVIEW E, 2012, 85 (01)