Characterization of Recombinant Thermococcus kodakaraensis (KOD) DNA Polymerases Produced Using Silkworm-Baculovirus Expression Vector System

被引:15
作者
Yamashita, Mami [1 ]
Xu, Jian [1 ]
Morokuma, Daisuke [1 ]
Hirata, Kazuma [1 ]
Hino, Masato [1 ]
Mon, Hiroaki [1 ]
Takahashi, Masateru [2 ]
Hamdan, Samir M. [2 ]
Sakashita, Kosuke [3 ]
Iiyama, Kazuhiro [4 ]
Banno, Yutaka [5 ]
Kusakabe, Takahiro [1 ]
Lee, Jae Man [1 ]
机构
[1] Kyushu Univ, Grad Sch Bioresource & Bioenvironm Sci, Lab Insect Genome Sci, Higashi Ku, 6-10-1 Hakozaki, Fukuoka 8128581, Japan
[2] King Abdullah Univ Sci & Technol, Lab DNA Replicat & Recombinat, Div Biol & Environm Sci & Engn, 4700 KAUST Thuwal, Jeddah 23955, Saudi Arabia
[3] King Abdullah Univ Sci & Technol, Biosci Core Lab, Prote, 4700 KAUST Thuwal, Jeddah 23955, Saudi Arabia
[4] Kyushu Univ, Lab Insect Pathol & Microbial Control, Inst Biol Control, Fac Agr,Grad Sch,Higashi Ku, Hakozaki 6-10-1, Fukuoka 8128581, Japan
[5] Kyushu Univ, Inst Genet Resources, Grad Sch Bio Resources & Bioenvironm Sci, Lab Silkworm Genet Resources,Higashi Ku, Hakozaki 6-10-1, Fukuoka 8128581, Japan
关键词
DNA polymerase; KOD; Silkworm; Baculovirus expression system; PYROCOCCUS-FURIOSUS; ESCHERICHIA-COLI; CHAIN-REACTION; PCR; EFFICIENT; FIDELITY; PURIFICATION; PERFORMANCE; STRATEGY; PROTEIN;
D O I
10.1007/s12033-017-0008-9
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The KOD DNA polymerase from Thermococcus kodakarensis (Tkod-Pol) has been preferred for PCR due to its rapid elongation rate, extreme thermostability and outstanding fidelity. Here in this study, we utilized silkworm-baculovirus expression vector system (silkworm-BEVS) to express the recombinant Tkod-Pol (rKOD) with N-terminal (rKOD-N) or C-terminal (rKOD-C) tandem fusion tags. By using BEVS, we produced functional rKODs with satisfactory yields, about 1.1 mg/larva for rKOD-N and 0.25 mg/larva for rKOD-C, respectively. Interestingly, we found that rKOD-C shows higher thermostability at 95 degrees C than that of rKOD-N, while that rKOD-N is significantly unstable after exposing to long period of heat-shock. We also assessed the polymerase activity as well as the fidelity of purified rKODs under various conditions. Compared with commercially available rKOD, which is expressed in E. coli expression system, rKOD-C exhibited almost the same PCR performance as the commercial rKOD did, while rKOD-N did lower performance. Taken together, our results suggested that silkworm-BEVS can be used to express and purify efficient rKOD in a commercial way.
引用
收藏
页码:221 / 233
页数:13
相关论文
共 42 条
[1]   Optimal conditions to use Pfu exo- DNA polymerase for highly efficient ligation-mediated polymerase chain reaction protocols [J].
Angers, M ;
Cloutier, JF ;
Castonguay, A ;
Drouin, R .
NUCLEIC ACIDS RESEARCH, 2001, 29 (16)
[2]   Structures of KOD and 9°N DNA Polymerases Complexed with Primer Template Duplex [J].
Bergen, Konrad ;
Betz, Karin ;
Welte, Wolfram ;
Diederichs, Kay ;
Marx, Andreas .
CHEMBIOCHEM, 2013, 14 (09) :1058-1062
[3]   Baculovirus expression system for heterologous multiprotein complexes [J].
Berger, I ;
Fitzgerald, DJ ;
Richmond, TJ .
NATURE BIOTECHNOLOGY, 2004, 22 (12) :1583-1587
[4]   Low-fidelity Pyrococcus furiosus DNA polymerase mutants useful in error-prone PCR -: art. no. e176 [J].
Biles, BD ;
Connolly, BA .
NUCLEIC ACIDS RESEARCH, 2004, 32 (22) :e176
[5]   Eukaryotic DNA polymerases: Proposal for a revised nomenclature [J].
Burgers, PMJ ;
Koonin, EV ;
Bruford, E ;
Blanco, L ;
Burtis, KC ;
Christman, MF ;
Copeland, WC ;
Friedberg, EC ;
Hanaoka, F ;
Hinkle, DC ;
Lawrence, CW ;
Nakanishi, M ;
Ohmori, H ;
Prakash, L ;
Prakash, S ;
Reynaud, CA ;
Sugino, A ;
Todo, T ;
Wang, ZG ;
Weill, JC ;
Woodgate, R .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2001, 276 (47) :43487-43490
[6]   PCR fidelity of Pfu DNA polymerase and other thermostable DNA polymerases [J].
Cline, J ;
Braman, JC ;
Hogrefe, HH .
NUCLEIC ACIDS RESEARCH, 1996, 24 (18) :3546-3551
[7]   MOLECULAR MECHANISMS OF MANGANESE MUTAGENESIS [J].
ELDEIRY, WS ;
DOWNEY, KM ;
SO, AG .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA-BIOLOGICAL SCIENCES, 1984, 81 (23) :7378-7382
[8]   DNA polymerase hybrids derived from the family-B enzymes of Pyrococcus furiosus and Thermococcus kodakarensis: improving performance in the polymerase chain reaction [J].
Elshawadfy, Ashraf M. ;
Keith, Brian J. ;
Ooi, H'Ng Ee ;
Kinsman, Thomas ;
Heslop, Pauline ;
Connolly, Bernard A. .
FRONTIERS IN MICROBIOLOGY, 2014, 5
[9]   Development of an efficient process intensification strategy for enhancing Pfu DNA polymerase production in recombinant Escherichia coli [J].
Hu, Jian-Hua ;
Wang, Feng ;
Liu, Chun-Zhao .
BIOPROCESS AND BIOSYSTEMS ENGINEERING, 2015, 38 (04) :651-659
[10]  
ISHINO Y, 1994, J BIOL CHEM, V269, P14655