Global distribution of Mycobacterium tuberculosis spoligotypes

被引：159

作者：

Filliol, I ^{[1
]}

Driscoll, JR

van Soolingen, D

Kreiswirth, BN

Kremer, K

Valétudie, G

Anh, DD

Barlow, R

Banerjee, D

Bifani, PJ

Brudey, K

Cataldi, A

Cooksey, RC

Cousins, DV

Dale, JW

Dellagostin, OA

Drobniewski, F

Engelmann, G

Ferdinand, S

Binzi, DG

Gordon, M

Gutierrez, MC

Haas, WH

Heersma, H

Källenius, G

Kassa-Kelembho, E

Koivula, T

Ly, HM

Makristathis, A

Mammina, C

Martin, G

Moström, P

Mokrousov, I

Narbonne, V

Narvskaya, O

Nastasi, A

Niobe-Eyangoh, SN

Pape, JW

Rasolofo-Razanamparany, V

Ridell, M

Rossetti, ML

Stauffer, F

Suffys, PN

Takiff, H

Texier-Maugein, J

Vincent, V

de Waard, JH

Sola, C

Rastogi, N

机构：

[1] Inst Pasteur Guadeloupe, Unite TB & Mycobacteries, BP 484, F-97165 Pointe A Pitre, Guadeloupe, France

[2] Wadsworth Ctr, Albany, NY USA

[3] Natl Inst Publ Hlth & Environm, NL-3720 BA Bilthoven, Netherlands

[4] Publ Hlth Res Inst, New York, NY USA

[5] Natl Inst Hyg & Epidemiol, Hanoi, Vietnam

[6] Gen Infirm, Leeds LS1 3EX, W Yorkshire, England

[7] Univ London St Georges Hosp, Sch Med, London SW17 0RE, England

[8] Inst Biotecnol, Castelar, Argentina

[9] Ctr Dis Control & Prevent, Atlanta, GA USA

[10] Australian Reference Lab Bovine TB, Dept Agr, S Perth, WA, Australia

[11] Univ Surrey, Guildford GU2 5XH, Surrey, England

[12] Univ Fed Pelotas, Pelotas, Brazil

[13] Dulwich Hosp, Publ Hlth Lab Serv, London SE22 8PT, England

[14] Heidelberg Univ, Childrens Hosp, D-6900 Heidelberg, Germany

[15] Inst Pasteur, Paris, France

[16] Robert Koch Inst, D-1000 Berlin, Germany

[17] Swedish Inst Infect Dis Control, Solna, Sweden

[18] Inst Pasteur, Bangui, Cent Afr Republ

[19] Univ Vienna, Inst Hyg, A-1010 Vienna, Austria

[20] Univ Palermo, I-90133 Palermo, Italy

[21] Bundesinst Gesundheitlichen Verbraucherschutz & V, Jena, Germany

[22] Inst Pasteur, St Petersburg, Russia

[23] CHU Brest, F-29285 Brest, France

[24] Univ Florence, I-50121 Florence, Italy

[25] Ctr Gheskio, Inst Natl Lab & Rech, Port Au Prince, Haiti

[26] Cornell Univ, Ithaca, NY 14853 USA

[27] Inst Pasteur, Antananarivo, Madagascar

[28] Univ Gothenburg, Gothenburg, Sweden

[29] Univ Fed Rio Grande do Sul, BR-90046900 Porto Alegre, RS, Brazil

[30] Bundesstaatliche Bakteriol Serol Untersuchungsans, Vienna, Austria

[31] Inst Oswaldo Cruz, BR-20001 Rio De Janeiro, Brazil

[32] CHU Bordeaux, Bordeaux, France

[33] Inst Invest Cient, Caracas, Venezuela

来源：

EMERGING INFECTIOUS DISEASES | 2002年 / 8卷 / 11期

关键词：

D O I：

10.3201/eid0811.020125

中图分类号：

R392 [医学免疫学]; Q939.91 [免疫学];

学科分类号：

100102 ;

摘要：

We present a short summary of recent observations on the global distribution of the major clades of the Mycobacterium tuberculosis complex, the causative agent of tuberculosis. This global distribution was defined by data-mining of an international spoligotyping database, SpolDB3. This database contains 11,708 patterns from as many clinical isolates originating from more than 90 countries. The 11,708 spoligotypes were clustered into 813 shared types. A total of 1,300 orphan patterns (clinical isolates showing a unique spoligotype) were also detected.

引用

页码：1347 / 1349

页数：3

共 7 条

[1] Glynn JR, 2002, EMERG INFECT DIS, V8, P843
[2] Comparison of methods based on different molecular epidemiological markers for typing of Mycobacterium tuberculosis complex strains:: Interlaboratory study of discriminatory power and reproducibility
Kremer, K
van Soolingen, D
Frothingham, R
Haas, WH
Hermans, PWM
Martín, C
Palittapongarnpim, P
Plikaytis, BB
Riley, LW
Yakrus, MA
Musser, JM
van Embden, JDA
[J]. JOURNAL OF CLINICAL MICROBIOLOGY, 1999, 37 (08) : 2607 - 2618
[3] A data-mining approach to spacer oligonucleotide typing of Mycobacterium tuberculosis
Sebban, M
Mokrousov, I
Rastogi, N
Sola, C
[J]. BIOINFORMATICS, 2002, 18 (02) : 235 - 243
[4] Mycobacterium tuberculosis phylogeny reconstruction based on combined numerical analysis with IS1081, IS6110, VNTR, and DR-based spoligotyping suggests the existence of two new phylogeographical clades
Sola, C
Filliol, I
Legrand, E
Mokrousov, I
Rastogi, N
[J]. JOURNAL OF MOLECULAR EVOLUTION, 2001, 53 (06) : 680 - 689
[5] Sola C, 2001, EMERG INFECT DIS, V7, P390
[6] Automated high-throughput genotyping for study of global epidemiology of Mycobacterium tuberculosis based on mycobacterial interspersed repetitive units
Supply, P
Lesjean, S
Savine, E
Kremer, K
van Soolingen, D
Locht, C
[J]. JOURNAL OF CLINICAL MICROBIOLOGY, 2001, 39 (10) : 3563 - 3571
[7] STRAIN IDENTIFICATION OF MYCOBACTERIUM-TUBERCULOSIS BY DNA FINGERPRINTING - RECOMMENDATIONS FOR A STANDARDIZED METHODOLOGY
VANEMBDEN, JDA
CAVE, MD
CRAWFORD, JT
DALE, JW
EISENACH, KD
GICQUEL, B
HERMANS, P
MARTIN, C
MCADAM, R
SHINNICK, TM
SMALL, PM
[J]. JOURNAL OF CLINICAL MICROBIOLOGY, 1993, 31 (02) : 406 - 409

← 1 →