Genome-Wide Analysis Reveals the Role of Mediator Complex in the Soybean-Phytophthora sojae Interaction

被引:8
|
作者
Xue, Dong [1 ]
Guo, Na [1 ]
Zhang, Xiao-Li [1 ]
Zhao, Jin-Ming [1 ]
Bu, Yuan-Peng [1 ]
Jiang, Dian-Liang [1 ]
Wang, Xiao-Ting [1 ]
Wang, Hai-Tang [1 ]
Guan, Rong-Zhan [1 ]
Xing, Han [1 ]
机构
[1] Nanjing Agr Univ, Coll Agr, Natl Ctr Soybean Improvement,Key Lab Biol & Genet, Minist Agr,State Key Lab Crop Genet & Germplasm E, Nanjing 210095, Jiangsu, Peoples R China
关键词
Glycine max (L.) Merr; Phytophthora sojae; mediator complex; GmMED16-1; plant defense; DEFENSE GENE-EXPRESSION; ENHANCES RESISTANCE; BASAL RESISTANCE; FUNGAL PATHOGENS; SUBUNIT; ARABIDOPSIS; OVEREXPRESSION; ARCHITECTURE; PROTEINS; DATABASE;
D O I
10.3390/ijms20184570
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The mediator complex is an essential link between transcription factors and RNA polymerase II, and mainly functions in the transduction of diverse signals to genes involved in different pathways. Limited information is available on the role of soybean mediator subunits in growth and development, and their participation in defense response regulation. Here, we performed genome-wide identification of the 95 soybean mediator subunits, which were unevenly localized on the 20 chromosomes and only segmental duplication events were detected. We focused on GmMED16-1, which is highly expressed in the roots, for further functional analysis. Transcription of GmMED16-1 was induced in response to Phytophthora sojae infection. Agrobacterium rhizogenes mediated soybean hairy root transformation was performed for the silencing of the GmMED16-1 gene. Silencing of GmMED16-1 led to an enhanced susceptibility phenotype and increased accumulation of P. sojae biomass in hairy roots of transformants. The transcript levels of NPR1, PR1a, and PR5 in the salicylic acid defense pathway in roots of GmMED16-1-silenced transformants were lower than those of empty-vector transformants. The results provide evidence that GmMED16-1 may participate in the soybean-P. sojae interaction via a salicylic acid-dependent process.
引用
收藏
页数:18
相关论文
共 50 条
  • [31] A genome-wide analysis of the USDA Soybean Isoline Collection
    Gilbert, Erin
    Merry, Ryan
    Campbell, Benjamin W.
    Stupar, Robert M.
    Lorenz, Aaron J.
    PLANT GENOME, 2023, 16 (02):
  • [32] Genome-wide expression analysis in a dwarf soybean mutant
    Zhang, Feng
    Shen, Yanting
    Sun, Shi
    Guo, Jianqiu
    Li, Congcong
    Wu, Cunxiang
    Li, Qing
    Nian, Hai
    Huang, Xianzhong
    Tian, Zhixi
    Han, Tianfu
    PLANT GENETIC RESOURCES-CHARACTERIZATION AND UTILIZATION, 2014, 12 : S70 - S73
  • [33] Genome-wide identification of Phytophthora sojae SNARE genes and functional characterization of the conserved SNARE PsYKT6
    Zhao, Wei
    Dong, Suomeng
    Ye, Wenwu
    Hua, Chenlei
    Meijer, Harold J. G.
    Dou, Xianying
    Govers, Francine
    Wang, Yuanchao
    FUNGAL GENETICS AND BIOLOGY, 2011, 48 (03) : 241 - 251
  • [34] Genome-wide analysis of the Arabidopsis leaf transcriptome reveals interaction of phosphate and sugar metabolism
    Muller, Renate
    Morant, Marc
    Jarmer, Hanne
    Nilsson, Lena
    Nielsen, Tom Hamborg
    PLANT PHYSIOLOGY, 2007, 143 (01) : 156 - 171
  • [35] Mapping of partial resistance to Phytophthora sojae in soybean PIs using whole-genome sequencing reveals a major QTL
    de Ronne, Maxime
    Santhanam, Parthasarathy
    Cinget, Benjamin
    Labbe, Caroline
    Lebreton, Amandine
    Ye, Heng
    Vuong, Tri D.
    Hu, Haifei
    Valliyodan, Babu
    Edwards, David
    Nguyen, Henry T.
    Belzile, Francois
    Belanger, Richard
    PLANT GENOME, 2022, 15 (01):
  • [36] Improved Statistics for Genome-Wide Interaction Analysis
    Ueki, Masao
    Cordell, Heather J.
    PLOS GENETICS, 2012, 8 (04): : 141 - 159
  • [37] A Novel Statistic for Genome-Wide Interaction Analysis
    Wu, Xuesen
    Dong, Hua
    Luo, Li
    Zhu, Yun
    Peng, Gang
    Reveille, John D.
    Xiong, Momiao
    PLOS GENETICS, 2010, 6 (09):
  • [38] Genome-wide eQTL Interaction Analysis with INTERSNP
    Herold, Christine
    Gamazon, Eric R.
    Becker, Tim
    Cox, Nancy J.
    GENETIC EPIDEMIOLOGY, 2010, 34 (08) : 941 - 941
  • [39] Genome-wide analysis of complex traits in cattle
    Pausch, H.
    Fries, R.
    ZUCHTUNGSKUNDE, 2014, 86 (01): : 47 - 57
  • [40] Genome-Wide Characterization of Nonreference Transposons Reveals Evolutionary Propensities of Transposons in Soybean
    Tian, Zhixi
    Zhao, Meixia
    She, Maoyun
    Du, Jianchang
    Cannon, Steven B.
    Liu, Xin
    Xu, Xun
    Qi, Xinpeng
    Li, Man-Wah
    Lam, Hon-Ming
    Ma, Jianxin
    PLANT CELL, 2012, 24 (11): : 4422 - 4436