Molecular Strain Typing and Characterisation of Toxigenic Clostridium difficile

被引：7

作者：

Dingle, Tanis C. ^{[1
]}

MacCannell, Duncan R. ^{[2
]}

机构：

[1] Icahn Sch Med Mt Sinai, New York, NY 10029 USA

[2] Ctr Dis Control & Prevent CDC, Atlanta, GA USA

来源：

CURRENT AND EMERGING TECHNOLOGIES FOR THE DIAGNOSIS OF MICROBIAL INFECTIONS | 2015年 / 42卷

关键词：

TANDEM-REPEAT ANALYSIS; MULTILOCUS VARIABLE-NUMBER; FIELD GEL-ELECTROPHORESIS; POLYMERASE-CHAIN-REACTION; SEQUENCE-BASED PCR; RESTRICTION-ENDONUCLEASE ANALYSIS; ARBITRARILY PRIMED PCR; REPETITIVE-ELEMENT PCR; DNA RAPD ASSAY; PULSED-FIELD;

D O I：

10.1016/bs.mim.2015.07.001

中图分类号：

Q5 [生物化学];

学科分类号：

071010 ; 081704 ;

摘要：

引用

页码：329 / 357

页数：29

共 116 条

[21] Microevolutionary analysis of Clostridium difficile genomes to investigate transmission [J].

Didelot, Xavier ;

Eyre, David W. ;

Cule, Madeleine ;

Ip, Camilla L. C. ;

Ansari, M. Azim ;

Griffiths, David ;

Vaughan, Alison ;

O'Connor, Lily ;

Golubchik, Tanya ;

Batty, Elizabeth M. ;

Piazza, Paolo ;

Wilson, Daniel J. ;

Bowden, Rory ;

Donnelly, Peter J. ;

Dingle, Kate E. ;

Wilcox, Mark ;

Walker, A. Sarah ;

Crook, Derrick W. ;

Peto, Tim E. A. ;

Harding, Rosalind M. .

GENOME BIOLOGY, 2012, 13 (12) :R118

[22] Isolation and characterisation of toxin A-negative, toxin B-positive Clostridium difficile in Dublin, Ireland [J].

Drudy, D. ;

Harnedy, N. ;

Fanning, S. ;

O'Mahony, R. ;

Kyne, L. .

CLINICAL MICROBIOLOGY AND INFECTION, 2007, 13 (03) :298-304

[23] Comparison of a Commercially Available Repetitive-Element PCR System (DiversiLab) with PCR Ribotyping for Typing of Clostridium difficile Strains [J].

Eckert, C. ;

Van Broeck, J. ;

Spigaglia, P. ;

Burghoffer, B. ;

Delmee, M. ;

Mastrantonio, P. ;

Barbut, F. .

JOURNAL OF CLINICAL MICROBIOLOGY, 2011, 49 (09) :3352-3354

[24] Whole-Genome Sequencing Demonstrates That Fidaxomicin Is Superior to Vancomycin for Preventing Reinfection and Relapse of Infection With Clostridium difficile [J].

Eyre, David W. ;

Babakhani, Farah ;

Griffiths, David ;

Seddon, Jaime ;

Elias, Carlos Del Ojo ;

Gorbach, Sherwood L. ;

Peto, Tim E. A. ;

Crook, DerrickW. ;

Walker, A. Sarah .

JOURNAL OF INFECTIOUS DISEASES, 2014, 209 (09) :1446-1451

[25] Clostridium difficile Mixed Infection and Reinfection [J].

Eyre, David W. ;

Walker, A. Sarah ;

Griffiths, David ;

Wilcox, Mark H. ;

Wyllie, David H. ;

Dingle, Kate E. ;

Crook, Derrick W. ;

Peto, Tim E. A. .

JOURNAL OF CLINICAL MICROBIOLOGY, 2012, 50 (01) :142-144

[26] Development and Validation of an Internationally-Standardized, High-Resolution Capillary Gel-Based Electrophoresis PCR-Ribotyping Protocol for Clostridium difficile [J].

Fawley, Warren N. ;

Knetsch, C. W. ;

MacCannell, Duncan R. ;

Harmanus, Celine ;

Du, Tim ;

Mulvey, Michael R. ;

Paulick, Ashley ;

Anderson, Lydia ;

Kuijper, E. J. ;

Wilcox, Mark H. .

PLOS ONE, 2015, 10 (02)

[27] Relapse Versus Reinfection: Recurrent Clostridium difficile Infection Following Treatment With Fidaxomicin or Vancomycin [J].

Figueroa, Iris ;

Johnson, Stuart ;

Sambol, Susan P. ;

Goldstein, Ellie J. C. ;

Citron, Diane M. ;

Gerding, Dale N. .

CLINICAL INFECTIOUS DISEASES, 2012, 55 :S104-S109

[28] The Changing Epidemiology of Clostridium difficile Infections [J].

Freeman, J. ;

Bauer, M. P. ;

Baines, S. D. ;

Corver, J. ;

Fawley, W. N. ;

Goorhuis, B. ;

Kuijper, E. J. ;

Wilcox, M. H. .

CLINICAL MICROBIOLOGY REVIEWS, 2010, 23 (03) :529-+

[29] A modified pulsed-field get electrophoresis (PFGE) protocol for subtyping previously non-PFGE typeable isolates of Clostridium difficile polymerase chain reaction ribotype 001 [J].

Gal, M ;

Northey, G ;

Brazier, JS .

JOURNAL OF HOSPITAL INFECTION, 2005, 61 (03) :231-236

[30] When Whole-Genome Alignments Just Won't Work: kSNP v2 Software for Alignment-Free SNP Discovery and Phylogenetics of Hundreds of Microbial Genomes [J].

Gardner, Shea N. ;

Hall, Barry G. .

PLOS ONE, 2013, 8 (12)

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