Genetic characteristics and epidemiology of inherited retinal degeneration in Taiwan

被引:50
作者
Chen, Ta-Ching [1 ,2 ]
Huang, Ding-Siang [1 ]
Lin, Chao-Wen [1 ]
Yang, Chang-Hao [1 ,3 ]
Yang, Chung-May [1 ,3 ]
Wang, Victoria Y. [4 ]
Lin, Jou-Wei [5 ]
Luo, Allen Chilun [6 ]
Hu, Fung-Rong [1 ,3 ]
Chen, Pei-Lung [2 ,6 ,7 ]
机构
[1] Natl Taiwan Univ Hosp, Dept Ophthalmol, Taipei, Taiwan
[2] Natl Taiwan Univ, Grad Inst Clin Med, Coll Med, Taipei, Taiwan
[3] Natl Taiwan Univ, Dept Ophthalmol, Coll Med, Taipei, Taiwan
[4] Case Western Reserve Univ, Sch Med, Cleveland, OH USA
[5] Natl Taiwan Univ Hosp, Dept Internal Med, Yunlin Branch, Huwei Township, Yunlin, Taiwan
[6] Natl Taiwan Univ, Grad Inst Med Genom & Prote, Coll Med, Taipei, Taiwan
[7] Natl Taiwan Univ Hosp, Dept Med Genet, Taipei, Taiwan
关键词
RETINITIS-PIGMENTOSA; MUTATIONS; DYSTROPHY; PHENOTYPE; VARIANTS; SPECTRUM; THERAPY; SAFETY; CONE;
D O I
10.1038/s41525-021-00180-1
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Inherited retinal degenerations (IRDs) are a group of phenotypically and genotypically heterogeneous disorders with substantial socioeconomic impact. In this cohort study, we tried to address the genetic characteristics and epidemiology of IRDs in Taiwan. Totally, 312 families with IRDs were identified and recruited and genetic testing was performed via probe capture-based NGS targeting 212 IRD-related genes. Statistical analysis was based on the proband of each affected family. Disease-causing genotypes were identified in 178 families (57.1%). ABCA4 variants were the most common cause of disease in this cohort (27 families, 15.2%), whereas CYP4V2 variants were the most common cause for the single phenotype-Bietti's crystalline dystrophy (12 families, 3.8%). Some variants such as ABCA4:c.1804C>T, CYP4V2:c.802-8_810delinsGC, and EYS:c6416G>A were population-specific disease-causing hotspots. Probands affected by ABCA4, RPGR, RP1L1, and CEP290 sought medical help earlier while patients affected by EYS and CYP4V2 visited our clinic at an older age. To evaluate the representativeness of our cohort in the genetic epidemiology of IRDs in Taiwan, our demographic data were compared with that of the total IRD population in Taiwan, obtained from the National Health Insurance Research Database. This is currently the largest-scale, comprehensive study investigating the genetic characteristics and epidemiology of IRD in Taiwan. These data could help patients and caregivers to adopt precision genomic medicine and novel gene therapies in near future.
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页数:8
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共 37 条
[1]   Mutations in REEP6 Cause Autosomal-Recessive Retinitis Pigmentosa [J].
Arno, Gavin ;
Agrawal, Smriti A. ;
Eblimit, Aiden ;
Bellingham, James ;
Xu, Mingchu ;
Wang, Feng ;
Chakarova, Christina ;
Parfitt, David A. ;
Lane, Amelia ;
Burgoyne, Thomas ;
Hull, Sarah ;
Carss, Keren J. ;
Fiorentino, Alessia ;
Hayes, Matthew J. ;
Munro, Peter M. ;
Nicols, Ralph ;
Pontikos, Nikolas ;
Holder, Graham E. ;
Asomugha, Chinwe ;
Raymond, F. Lucy ;
Moore, Anthony T. ;
Plagnol, Vincent ;
Michaelides, Michel ;
Hardcastle, Alison J. ;
Li, Yumei ;
Cukras, Catherine ;
Webster, Andrew R. ;
Cheetham, Michael E. ;
Chen, Rui .
AMERICAN JOURNAL OF HUMAN GENETICS, 2016, 99 (06) :1305-1315
[2]   ABCA4-associated disease as a model for missing heritability in autosomal recessive disorders: novel noncoding splice, cis-regulatory, structural, and recurrent hypomorphic variants [J].
Bauwens, Miriam ;
Garanto, Alejandro ;
Sangermano, Riccardo ;
Naessens, Sarah ;
Weisschuh, Nicole ;
De Zaeytijd, Julie ;
Khan, Mubeen ;
Sadler, Francoise ;
Balikova, Irina ;
Van Cauwenbergh, Caroline ;
Rosseel, Toon ;
Bauwens, Jim ;
De Leeneer, Kim ;
De Jaegere, Sarah ;
Van Laethem, Thalia ;
De Vries, Meindert ;
Carss, Keren ;
Arno, Gavin ;
Fakin, Ana ;
Webster, Andrew R. ;
de l'Argentiere, Thomy J. L. de Ravel ;
Sznajer, Yves ;
Vuylsteke, Marnik ;
Kohl, Susanne ;
Wissinger, Bernd ;
Cherry, Timothy ;
Collin, Rob W. J. ;
Cremers, Frans P. M. ;
Leroy, Bart P. ;
De Baere, Elfride .
GENETICS IN MEDICINE, 2019, 21 (08) :1761-1771
[3]   Safety and durability of effect of contralateral-eye administration of AAV2 gene therapy in patients with childhood-onset blindness caused by RPE65 mutations: a follow-on phase 1 trial [J].
Bennett, Jean ;
Wellman, Jennifer ;
Marshall, Kathleen A. ;
McCague, Sarah ;
Ashtari, Manzar ;
DiStefano-Pappas, Julie ;
Elci, Okan U. ;
Chung, Daniel C. ;
Sun, Junwei ;
Wright, J. Fraser ;
Cross, Dominique R. ;
Aravand, Puya ;
Cyckowski, Laura L. ;
Bennicelli, Jeannette L. ;
Mingozzi, Federico ;
Auricchio, Alberto ;
Pierce, Eric A. ;
Ruggiero, Jason ;
Leroy, Bart P. ;
Simonelli, Francesca ;
High, Katherine A. ;
Maguire, Albert M. .
LANCET, 2016, 388 (10045) :661-672
[4]   The molecular basis of human retinal and vitreoretinal diseases [J].
Berger, Wolfgang ;
Kloeckener-Gruissem, Barbara ;
Neidhardt, John .
PROGRESS IN RETINAL AND EYE RESEARCH, 2010, 29 (05) :335-375
[5]   Generalized Choriocapillaris Dystrophy, a Distinct Phenotype in the Spectrum of ABCA4-Associated Retinopathies [J].
Bertelsen, Mette ;
Zernant, Jana ;
Larsen, Michael ;
Duno, Morten ;
Allikmets, Rando ;
Rosenberg, Thomas .
INVESTIGATIVE OPHTHALMOLOGY & VISUAL SCIENCE, 2014, 55 (04) :2766-2776
[6]   Panel-Based Population Next-Generation Sequencing for Inherited Retinal Degenerations [J].
Carrigan, Matthew ;
Duignan, Emma ;
Malone, Conor P. G. ;
Stephenson, Kirk ;
Saad, Tahira ;
McDermott, Ciara ;
Green, Andrew ;
Keegan, David ;
Humphries, Peter ;
Kenna, Paul F. ;
Farrar, G. Jane .
SCIENTIFIC REPORTS, 2016, 6
[7]   Comprehensive Rare Variant Analysis via Whole-Genome Sequencing to Determine the Molecular Pathology of Inherited Retinal Disease [J].
Carss, Keren J. ;
Arno, Gavin ;
Erwood, Marie ;
Stephens, Jonathan ;
Sanchis-Juan, Alba ;
Hull, Sarah ;
Megy, Karyn ;
Grozeva, Detelina ;
Dewhurst, Eleanor ;
Malka, Samantha ;
Plagnol, Vincent ;
Penkett, Christopher ;
Stirrups, Kathleen ;
Rizzo, Roberta ;
Wright, Genevieve ;
Josifova, Dragana ;
Bitner-Glindzicz, Maria ;
Scott, Richard H. ;
Clement, Emma ;
Allen, Louise ;
Armstrong, Ruth ;
Brady, Angela F. ;
Carmichael, Jenny ;
Chitre, Manali ;
Henderson, Robert H. H. ;
Hurst, Jane ;
MacLaren, Robert E. ;
Murphy, Elaine ;
Paterson, Joan ;
Rosser, Elisabeth ;
Thompson, Dorothy A. ;
Wakeling, Emma ;
Ouwehand, Willem H. ;
Michaelides, Michel ;
Moore, Anthony T. ;
Webster, Andrew R. ;
Raymond, F. Lucy .
AMERICAN JOURNAL OF HUMAN GENETICS, 2017, 100 (01) :75-90
[8]   Impact of Retinitis Pigmentosa on Quality of Life, Mental Health, and Employment Among Young Adults [J].
Chaumet-Riffaud, Anne Elisabeth ;
Chaumet-Riffaud, Philippe ;
Cariou, Anaelle ;
Devisme, Celine ;
Audo, Isabelle ;
Sahel, Jose-Alain ;
Mohand-Said, Saddek .
AMERICAN JOURNAL OF OPHTHALMOLOGY, 2017, 177 :169-174
[9]   Leber congenital amaurosis: Clinical correlations with genotypes, gene therapy trials update, and future directions [J].
Chung, Daniel C. ;
Traboulsi, Elias I. .
JOURNAL OF AAPOS, 2009, 13 (06) :587-592
[10]   Panel-based genetic diagnostic testing for inherited eye diseases is highly accurate and reproducible, and more sensitive for variant detection, than exome sequencing [J].
Consugar, Mark B. ;
Navarro-Gomez, Daniel ;
Place, Emily M. ;
Bujakowska, Kinga M. ;
Sousa, Maria E. ;
Fonseca-Kelly, Zoe D. ;
Taub, Daniel G. ;
Janessian, Maria ;
Wang, Dan Yi ;
Au, Elizabeth D. ;
Sims, Katherine B. ;
Sweetser, David A. ;
Fulton, Anne B. ;
Liu, Qin ;
Wiggs, Janey L. ;
Gai, Xiaowu ;
Pierce, Eric A. .
GENETICS IN MEDICINE, 2015, 17 (04) :253-261