Whole genome sequencing in Mycobacterium tuberculosis

被引：6
作者：
Spitaleri, Andrea [1 ]
Ghodousi, Arash [1 ]
Miotto, Paolo [1 ]
Cirillo, Daniela Maria [1 ]
机构：
[1] IRCCS San Raffaele Sci Inst, Div Immunol Transplantat & Infect Dis, Emerging Bacterial Pathogens Unit, Via Olgettina 58, I-20132 Milan, Italy
来源：
ANNALS OF TRANSLATIONAL MEDICINE | 2019年 / 7卷
关键词：
D O I：
10.21037/atm.2019.07.28
中图分类号：
R73 [肿瘤学];
学科分类号：
100214 ;
摘要：
引用
收藏
页数：4
相关论文
共 16 条
[1]   Prediction of Susceptibility to First-Line Tuberculosis Drugs by DNA Sequencing [J].
Allix-Beguec, Caroline ;
Arandjelovic, Irena ;
Bi, Lijun ;
Beckert, Patrick ;
Bonnet, Maryline ;
Bradley, Phelim ;
Cabibbe, Andrea M. ;
Cancino-Munoz, Irving ;
Caulfield, Mark J. ;
Chaiprasert, Angkana ;
Cirillo, Daniela M. ;
Clifton, David ;
Comas, Inaki ;
Crook, Derrick W. ;
De Filippo, Maria R. ;
de Neeling, Han ;
Diel, Roland ;
Drobniewski, Francis A. ;
Faksri, Kiatichai ;
Farhat, Maha R. ;
Fleming, Joy ;
Fowler, Philip ;
Fowler, Tom A. ;
Gao, Qian ;
Gardy, Jennifer ;
Gascoyne-Binzi, Deborah ;
Gibertoni-Cruz, Ana-Luiza ;
Gil-Brusola, Ana ;
Golubchik, Tanya ;
Gonzalo, Ximena ;
Grandjean, Louis ;
He, Guangxue ;
Guthrie, Jennifer L. ;
Hoosdally, Sarah ;
Hunt, Martin ;
Iqbal, Zamin ;
Ismail, Nazir ;
Johnston, James ;
Khanzada, Faisal M. ;
Khor, Chiea C. ;
Kohl, Thomas A. ;
Kong, Clare ;
Lipworth, Sam ;
Liu, Qingyun ;
Maphalala, Gugu ;
Martinez, Elena ;
Mathys, Vanessa ;
Merker, Matthias ;
Miotto, Paolo ;
Mistry, Nerges .
NEW ENGLAND JOURNAL OF MEDICINE, 2018, 379 (15) :1403-1415
[2]  
[Anonymous], 2018, Technical report on critical concentrations for drug susceptibility testing of medicines used in the treatment of drug-resistant tuberculosis
[3]   Low-level antibacterial resistance: a gateway to clinical resistance [J].
Baquero, F .
DRUG RESISTANCE UPDATES, 2001, 4 (02) :93-105
[4]   Integrating standardized whole genome sequence analysis with a global Mycobacterium tuberculosis antibiotic resistance knowledgebase [J].
Ezewudo, Matthew ;
Borens, Amanda ;
Chiner-Oms, Alvaro ;
Miotto, Paolo ;
Chindelevitch, Leonid ;
Starks, Angela M. ;
Hanna, Debra ;
Liwskil, Richard ;
Zignol, Matteo ;
Gilpin, Christopher ;
Niemann, Stefan ;
Kohl, Thomas Andreas ;
Warren, Robin M. ;
Crook, Derrick ;
Gagneux, Sebastien ;
Hoffner, Sven ;
Rodrigues, Camilla ;
Comas, Inaki ;
Engelthaler, David M. ;
Alland, David ;
Rigouts, Leen ;
Lange, Christoph ;
Dheda, Keertan ;
Hasan, Rumina ;
McNerney, Ruth ;
Cirillo, Daniela M. ;
Schito, Marco ;
Rodwell, Timothy C. ;
Posey, James .
SCIENTIFIC REPORTS, 2018, 8
[5]  
Ghodousi A, 2019, ANTIMICROB AGENTS CH, V63, DOI [10.1128/AAC.00092-19, 10.1128/aac.00092-19]
[6]   The Case for Using Higher Doses of First Line Anti-Tuberculosis Drugs to Optimize Efficacy [J].
Goutelle, Sylvain ;
Bourguignon, Laurent ;
Maire, Pascal ;
Jelliffe, Roger W. ;
Neely, Michael N. .
CURRENT PHARMACEUTICAL DESIGN, 2014, 20 (39) :6191-6206
[7]   Whole-Genome Sequencing for Drug Resistance Profile Prediction in Mycobacterium tuberculosis [J].
Gygli, Sebastian M. ;
Keller, Peter M. ;
Ballif, Marie ;
Blochliger, Nicolas ;
Homke, Rico ;
Reinhard, Miriam ;
Loiseau, Chloe ;
Ritter, Claudia ;
Sander, Peter ;
Borrell, Sonia ;
Collantes Loo, Jimena ;
Avihingsanon, Anchalee ;
Gnokoro, Joachim ;
Yotebieng, Marcel ;
Egger, Matthias ;
Gagneux, Sebastien ;
Bottger, Erik C. .
ANTIMICROBIAL AGENTS AND CHEMOTHERAPY, 2019, 63 (04)
[8]   Interpreting whole genome sequencing for investigating tuberculosis transmission: a systematic review [J].
Hatherell, Hollie-Ann ;
Colijn, Caroline ;
Stagg, Helen R. ;
Jackson, Charlotte ;
Winter, Joanne R. ;
Abubakar, Ibrahim .
BMC MEDICINE, 2016, 14
[9]   Diagnostic Accuracy and Reproducibility of WHO-Endorsed Phenotypic Drug Susceptibility Testing Methods for First-Line and Second-Line Antituberculosis Drugs [J].
Horne, David J. ;
Pinto, Lancelot M. ;
Arentz, Matthew ;
Lin, S. -Y. Grace ;
Desmond, Edward ;
Flores, Laura L. ;
Steingart, Karen R. ;
Minion, Jessica .
JOURNAL OF CLINICAL MICROBIOLOGY, 2013, 51 (02) :393-401
[10]  
Iketleng T, 2018, TUBERC RES TREAT, V2018
12