Ab initio path-integral molecular dynamics and the quantum nature of hydrogen bonds

被引:3
作者
Feng, Yexin [1 ,2 ]
Chen, Ji [1 ,2 ]
Li, Xin-Zheng [2 ,3 ]
Wang, Enge [1 ,2 ,3 ]
机构
[1] Peking Univ, Int Ctr Quantum Mat, Beijing 100871, Peoples R China
[2] Peking Univ, Sch Phys, Beijing 100871, Peoples R China
[3] Collaborat Innovat Ctr Quantum Matter, Beijing 100871, Peoples R China
基金
中国博士后科学基金; 中国国家自然科学基金;
关键词
ab initio calculations; isotope; molecular dynamics; hydrogen bonds; ATOMIC THEORY; COMPUTATION; SYSTEM; ALGORITHMS; TRANSITION; SIMULATION; EFFICIENT; PROTON; FORCES; POINT;
D O I
10.1088/1674-1056/25/1/013104
中图分类号
O4 [物理学];
学科分类号
0702 ;
摘要
The hydrogen bond (HB) is an important type of intermolecular interaction, which is generally weak, ubiquitous, and essential to life on earth. The small mass of hydrogen means that many properties of HBs are quantum mechanical in nature. In recent years, because of the development of computer simulation methods and computational power, the influence of nuclear quantum effects (NQEs) on the structural and energetic properties of some hydrogen bonded systems has been intensively studied. Here, we present a review of these studies by focussing on the explanation of the principles underlying the simulation methods, i.e., the ab initio path-integral molecular dynamics. Its extension in combination with the thermodynamic integration method for the calculation of free energies will also be introduced. We use two examples to show how this influence of NQEs in realistic systems is simulated in practice.
引用
收藏
页数:8
相关论文
共 59 条
  • [1] Quantum scattering calculations on chemical reactions
    Althorpe, SC
    Clary, DC
    [J]. ANNUAL REVIEW OF PHYSICAL CHEMISTRY, 2003, 54 : 493 - 529
  • [2] MOLECULAR-DYNAMICS SIMULATIONS AT CONSTANT PRESSURE AND-OR TEMPERATURE
    ANDERSEN, HC
    [J]. JOURNAL OF CHEMICAL PHYSICS, 1980, 72 (04) : 2384 - 2393
  • [3] [Anonymous], 2010, Quantum mechanics and path integrals, DOI 10.1063/1.3048320
  • [4] Probability distributions for complex systems: Adaptive umbrella sampling of the potential energy
    Bartels, C
    Karplus, M
    [J]. JOURNAL OF PHYSICAL CHEMISTRY B, 1998, 102 (05) : 865 - 880
  • [5] BERNE BJ, 1986, ANNU REV PHYS CHEM, V37, P401
  • [6] PATH-INTEGRAL COMPUTATION OF THE LOW-TEMPERATURE PROPERTIES OF LIQUID-HE-4
    CEPERLEY, DM
    POLLOCK, EL
    [J]. PHYSICAL REVIEW LETTERS, 1986, 56 (04) : 351 - 354
  • [7] PATH-INTEGRALS IN THE THEORY OF CONDENSED HELIUM
    CEPERLEY, DM
    [J]. REVIEWS OF MODERN PHYSICS, 1995, 67 (02) : 279 - 355
  • [8] EXPLOITING THE ISOMORPHISM BETWEEN QUANTUM-THEORY AND CLASSICAL STATISTICAL-MECHANICS OF POLYATOMIC FLUIDS
    CHANDLER, D
    WOLYNES, PG
    [J]. JOURNAL OF CHEMICAL PHYSICS, 1981, 74 (07) : 4078 - 4095
  • [9] Hydrogen bonding in water
    Chen, B
    Ivanov, I
    Klein, ML
    Parrinello, M
    [J]. PHYSICAL REVIEW LETTERS, 2003, 91 (21)
  • [10] Quantum simulation of low-temperature metallic liquid hydrogen
    Chen, Ji
    Li, Xin-Zheng
    Zhang, Qianfan
    Probert, Matthew I. J.
    Pickard, Chris J.
    Needs, Richard J.
    Michaelides, Angelos
    Wang, Enge
    [J]. NATURE COMMUNICATIONS, 2013, 4