Using machine learning techniques predicts prognosis of patients with Ewing sarcoma

被引:12
作者
Chen, Wenhao [1 ,2 ]
Zhou, Chaoming [1 ,2 ]
Yan, Zhiyu [3 ]
Chen, Hui [1 ]
Lin, Kainan [1 ]
Zheng, Zibing [2 ]
Xu, Wenchen [1 ]
机构
[1] Fujian Med Univ, Fujian Matern & Child Hlth Hosp, Affiliated Hosp, Dept Pediat Surg, 18 Daoshan Rd, Fuzhou 350001, Peoples R China
[2] Fujian Prov Childrens Hosp, Dept Pediat Orthoped, Fuzhou, Peoples R China
[3] Massachusetts Gen Hosp, Dept Neurol, Boston, MA 02114 USA
关键词
Ewing sarcoma; machine learning; prediction; prognosis; survival; SURVIVAL; OUTCOMES; FAMILY; IMPACT;
D O I
10.1002/jor.24991
中图分类号
R826.8 [整形外科学]; R782.2 [口腔颌面部整形外科学]; R726.2 [小儿整形外科学]; R62 [整形外科学(修复外科学)];
学科分类号
摘要
Ewing sarcoma is one of the most common types of malignant bone tumor in children and adolescents. However, to our limited knowledge, no study exists that uses machine learning to create algorithms for the prediction of survivorship for Ewing sarcoma. About 2332 patients with Ewing sarcoma between 1975 and 2016 in the United States were identified from Surveillance, Epidemiology, and End Results (SEER) program. All patients in the data set were randomly assigned into the training set and the testing set, at a 2:8 ratio. In the training set, boosted decision tree, support vector machine, nonparametric random forest method, and neural network models were developed to predict the 5-year survivorship. The overall survival rate in 5-year follow-up of this patient cohort is 60.72%. With respect to the algorithms for both cancer specific survival and overall survival, there was slight superiority in our performance metrics favoring the random forest method over the other models for survival prediction, with 77/83% sensitivity and 91/94% specificity, respectively. The random forest method was incorporated into a freely available web-based application. This application can be accessed through . Clinical Significance: To the best of our knowledge, this is the first available predictive model for predicting survival in Ewing sarcoma based on machine-learning algorithms. This study may provide orthopedic surgeons with an easily accessible prediction tool when dealing with patients suffering from Ewing sarcoma.
引用
收藏
页码:2519 / 2527
页数:9
相关论文
共 22 条
[1]  
[Anonymous], 2003, ANN ONCOL, DOI DOI 10.1093/ANN0NC/MDG077
[2]   Clinical features and outcomes in patients with Ewing sarcoma and regional lymph node involvement [J].
Applebaum, Mark A. ;
Goldsby, Robert ;
Neuhaus, John ;
DuBois, Steven G. .
PEDIATRIC BLOOD & CANCER, 2012, 59 (04) :617-620
[3]   Developing a Prognostic Model for Localized Ewing Sarcoma Family of Tumors: A Single Institutional Experience of 224 Cases Treated With Uniform Chemotherapy Protocol [J].
Biswas, Bivas ;
Rastogi, S. ;
Khan, S. A. ;
Shukla, N. K. ;
Deo, S. V. S. ;
Agarwala, S. ;
Mohanti, B. K. ;
Sharma, M. C. ;
Vishnubhatla, Sreenivas ;
Bakhshi, S. .
JOURNAL OF SURGICAL ONCOLOGY, 2015, 111 (06) :683-689
[4]   Prognostic factors for survival in Ewing sarcoma: A systematic review [J].
Bosma, S. E. ;
Ayu, O. ;
Fiocco, M. ;
Gelderblom, H. ;
Dijkstra, P. D. S. .
SURGICAL ONCOLOGY-OXFORD, 2018, 27 (04) :603-610
[5]   Predicting Ewing Sarcoma Treatment Outcome Using Infrared Spectroscopy and Machine Learning [J].
Chaber, Radoslaw ;
Arthur, Christopher J. ;
Lach, Kornelia ;
Raciborska, Anna ;
Michalak, Elzbieta ;
Bilska, Katarzyna ;
Drabko, Katarzyna ;
Depciuch, Joanna ;
Kaznowska, Ewa ;
Cebulski, Jozef .
MOLECULES, 2019, 24 (06)
[6]   Ewing Sarcoma of the Spine Prognostic Variables for Survival and Local Control in Surgically Treated Patients [J].
Charest-Morin, Raphaele ;
Dirks, Michael S. ;
Patel, Shreyaskumar ;
Boriani, Stefano ;
Luzzati, Alessandro ;
Fehlings, Michael G. ;
Fisher, Charles G. ;
Dekutoski, Mark B. ;
Williams, Richard ;
Quraishi, Nasir A. ;
Gokaslan, Ziya L. ;
Bettegowda, Chetan ;
Germscheid, Niccole M. ;
Varga, Peter P. ;
Rhines, Laurence D. .
SPINE, 2018, 43 (09) :622-629
[7]   Characteristics and prognosis of pelvic Ewing sarcoma: a SEER population-based study [J].
Chen, Li ;
Long, Cheng ;
Liu, Jiaxin ;
Xing, Fei ;
Duan, Xin .
PEERJ, 2019, 7
[8]   Malignant giant cell tumor of bone or soft tissue treated by surgery with or without radiotherapy [J].
Chen, Wenhao ;
Yan, Zhiyu ;
Tirumala, Venkat .
JOURNAL OF ORTHOPAEDIC RESEARCH, 2020, 38 (10) :2139-2148
[9]  
Fernández-Delgado M, 2014, J MACH LEARN RES, V15, P3133
[10]   Chemotherapy response is an important predictor of local recurrence in Ewing sarcoma [J].
Lin, Patrick P. ;
Jaffe, Norman ;
Herzog, Cynthia E. ;
Costelloe, Colleen M. ;
Deavers, Michael T. ;
Kelly, Jeana S. ;
Patel, Shreyaskumar R. ;
Madewell, John E. ;
Lewis, Valerae O. ;
Cannon, Christopher P. ;
Benjamin, Robert S. ;
Yasko, Alan W. .
CANCER, 2007, 109 (03) :603-611