Driving proteins off DNA using applied tension

被引:88
作者
Marko, JF [1 ]
Siggia, ED [1 ]
机构
[1] CORNELL UNIV, ATOM & SOLID STATE PHYS LAB, ITHACA, NY 14853 USA
基金
美国国家科学基金会;
关键词
D O I
10.1016/S0006-3495(97)78248-1
中图分类号
Q6 [生物物理学];
学科分类号
071011 ;
摘要
Proteins that bind DNA so as to reduce its end-to-end length can be dissociated by application of force. The thermodynamics of this process are discussed, with special attention to the case of histones bound to DNA (i.e., a string of nucleosomes, or chromatin fiber). The histone octamer is predicted to be driven off chromatin fiber for tensions >2 piconewtons.
引用
收藏
页码:2173 / 2178
页数:6
相关论文
共 41 条
[1]   NUCLEOSOME CORE PARTICLE STABILITY AND CONFORMATIONAL CHANGE - EFFECT OF TEMPERATURE, PARTICLE AND NACL CONCENTRATIONS, AND CROSSLINKING OF HISTONE-H3 SULFHYDRYL-GROUPS [J].
AUSIO, J ;
SEGER, D ;
EISENBERG, H .
JOURNAL OF MOLECULAR BIOLOGY, 1984, 176 (01) :77-104
[2]   INTERACTION OF CHROMATIN WITH NACL AND MGCL2 - SOLUBILITY AND BINDING-STUDIES, TRANSITION TO AND CHARACTERIZATION OF THE HIGHER-ORDER STRUCTURE [J].
AUSIO, J ;
BOROCHOV, N ;
SEGER, D ;
EISENBERG, H .
JOURNAL OF MOLECULAR BIOLOGY, 1984, 177 (03) :373-398
[3]   Force: A new structural control parameter? [J].
Bensimon, D .
STRUCTURE, 1996, 4 (08) :885-889
[4]  
BOULANGER PA, 1987, J BIOL CHEM, V262, P15098
[5]   PREDICTING DNA DUPLEX STABILITY FROM THE BASE SEQUENCE [J].
BRESLAUER, KJ ;
FRANK, R ;
BLOCKER, H ;
MARKY, LA .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1986, 83 (11) :3746-3750
[6]   ENTROPIC ELASTICITY OF LAMBDA-PHAGE DNA [J].
BUSTAMANTE, C ;
MARKO, JF ;
SIGGIA, ED ;
SMITH, S .
SCIENCE, 1994, 265 (5178) :1599-1600
[7]  
CASTRO CA, 1994, THESIS U OREGON
[8]   DNA: An extensible molecule [J].
Cluzel, P ;
Lebrun, A ;
Heller, C ;
Lavery, R ;
Viovy, JL ;
Chatenay, D ;
Caron, F .
SCIENCE, 1996, 271 (5250) :792-794
[9]   NUCLEOSOME DISSOCIATION AT PHYSIOLOGICAL IONIC STRENGTHS [J].
COTTON, RW ;
HAMKALO, BA .
NUCLEIC ACIDS RESEARCH, 1981, 9 (02) :445-457
[10]   STATISTICAL POSITIONING OF NUCLEOSOMES BY SPECIFIC PROTEIN-BINDING TO AN UPSTREAM ACTIVATING SEQUENCE IN YEAST [J].
FEDOR, MJ ;
LUE, NF ;
KORNBERG, RD .
JOURNAL OF MOLECULAR BIOLOGY, 1988, 204 (01) :109-127