The Human Gene Mutation Database: towards a comprehensive repository of inherited mutation data for medical research, genetic diagnosis and next-generation sequencing studies

被引:989
|
作者
Stenson, Peter D. [1 ]
Mort, Matthew [1 ]
Ball, Edward V. [1 ]
Evans, Katy [1 ]
Hayden, Matthew [1 ]
Heywood, Sally [1 ]
Hussain, Michelle [1 ]
Phillips, Andrew D. [1 ]
Cooper, David N. [1 ]
机构
[1] Cardiff Univ, Inst Med Genet, Sch Med, Heath Pk, Cardiff CF14 4XN, S Glam, Wales
关键词
INCIDENTAL FINDINGS; RECESSIVE DISORDERS; VARIANTS; GENOME; EXOME; DISEASE; NUCLEOTIDE; CONSEQUENCES; INDIVIDUALS; PREDICTION;
D O I
10.1007/s00439-017-1779-6
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
The Human Gene Mutation Database (HGMD(A (R))) constitutes a comprehensive collection of published germline mutations in nuclear genes that underlie, or are closely associated with human inherited disease. At the time of writing (March 2017), the database contained in excess of 203,000 different gene lesions identified in over 8000 genes manually curated from over 2600 journals. With new mutation entries currently accumulating at a rate exceeding 17,000 per annum, HGMD represents de facto the central unified gene/disease-oriented repository of heritable mutations causing human genetic disease used worldwide by researchers, clinicians, diagnostic laboratories and genetic counsellors, and is an essential tool for the annotation of next-generation sequencing data. The public version of HGMD (http://www.hgmd.org) is freely available to registered users from academic institutions and non-profit organisations whilst the subscription version (HGMD Professional) is available to academic, clinical and commercial users under license via QIAGEN Inc.
引用
收藏
页码:665 / 677
页数:13
相关论文
共 24 条
  • [21] Discovery of mutations in Chenopodium quinoa Willd through EMS mutagenesis and mutation screening using pre-selection phenotypic data and next-generation sequencing
    Mestanza, Camilo
    Riegel, Ricardo
    Vasquez, Santiago C.
    Veliz, Diana
    Cruz-Rosero, Nicolas
    Canchignia, Hayron
    Silva, Herman
    JOURNAL OF AGRICULTURAL SCIENCE, 2018, 156 (10) : 1196 - 1204
  • [22] Next-Generation Sequencing of Colorectal Cancers in Chinese: Identification of a Recurrent Frame-Shift and Gain-of-Function Indel Mutation in the TFDP1 Gene
    Chen, Chen
    Liu, Jie
    Zhou, Fan
    Sun, Jianbo
    Li, Lisha
    Jin, Chengmeng
    Shao, Jiaofang
    Jiang, Huawei
    Zhao, Na
    Zheng, Shu
    Lin, Biaoyang
    OMICS-A JOURNAL OF INTEGRATIVE BIOLOGY, 2014, 18 (10) : 625 - 635
  • [23] Targeted next-generation sequencing identifies a homozygous nonsense mutation in ABHD12, the gene underlying PHARC, in a family clinically diagnosed with Usher syndrome type 3
    Eisenberger, Tobias
    Slim, Rima
    Mansour, Ahmad
    Nauck, Markus
    Nuernberg, Gudrun
    Nuernberg, Peter
    Decker, Christian
    Dafinger, Claudia
    Ebermann, Inga
    Bergmann, Carsten
    Bolz, Hanno Joern
    ORPHANET JOURNAL OF RARE DISEASES, 2012, 7
  • [24] A novel stopgain mutation c.G992A (p.W331X) in TACR3 gene was identified in nonobstructive azoospermia by targeted next-generation sequencing
    Geng, Dongfeng
    Yang, Xiao
    Wang, Ruixue
    Deng, Shu
    Li, Leilei
    Hu, Xiaonan
    Jiang, Yuting
    Liu, Ruizhi
    JOURNAL OF CLINICAL LABORATORY ANALYSIS, 2019, 33 (03)