Microbial sequences retrieved from environmental samples from seasonal Arctic snow and meltwater from Svalbard, Norway

被引:79
作者
Larose, Catherine [1 ,2 ,3 ]
Berger, Sibel [4 ]
Ferrari, Christophe [1 ]
Navarro, Elisabeth [4 ]
Dommergue, Aurelien [1 ]
Schneider, Dominique [2 ,3 ]
Vogel, Timothy M. [4 ]
机构
[1] Univ Grenoble 1, CNRS, Lab Glaciol & Geophys Environm, UMR 5183, F-38402 St Martin Dheres, France
[2] Univ Grenoble 1, Lab Adaptat & Pathogenie Microorganismes, F-38042 Grenoble 9, France
[3] CNRS, UMR 5163, Grenoble, France
[4] Univ Lyon, CNRS, Environm Microbial Genom Grp, Lab AMPERE,Ecole Cent Lyon,UMR 5005, F-69134 Ecully, France
关键词
Arctic; Snow bacteria; Biodiversity; Environmental samples; Meltwater; DIVERSITY; BACTERIA; MICROORGANISMS; CLOSTRIDIA; ECOLOGY; BENEATH; LIFE; SOIL; ICE; MAT;
D O I
10.1007/s00792-009-0299-2
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
16S rRNA gene (rrs) clone libraries were constructed from two snow samples (May 11, 2007 and June 7, 2007) and two meltwater samples collected during the spring of 2007 in Svalbard, Norway (79A degrees N). The libraries covered 19 different microbial classes, including Betaproteobacteria (21.3%), Sphingobacteria (16.4%), Flavobacteria (9.0%), Acidobacteria (7.7%) and Alphaproteobacteria (6.5%). Significant differences were detected between the two sets of sample libraries. First, the meltwater libraries had the highest community richness (Chao1: 103.2 and 152.2) and Shannon biodiversity indices (between 3.38 and 3.59), when compared with the snow libraries (Chao1: 14.8 and 59.7; Shannon index: 1.93 and 3.01). Second, a <<-LIBSHUFF analyses determined that the bacterial communities in the snow libraries were significantly different from those of the meltwater libraries. Despite these differences, our data also support the theory that a common core group of microbial populations exist within a variety of cryohabitats.
引用
收藏
页码:205 / 212
页数:8
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