Differentially expressed lncRNAs and mRNAs identified by microarray analysis in GBS patients vs healthy controls

被引:14
作者
Xu, Jing [1 ]
Gao, Chao [1 ]
Zhang, Fang [1 ]
Ma, Xiaofeng [1 ]
Peng, Xiaolin [2 ]
Zhang, Rongxin [3 ]
Kong, Dexin [2 ]
Simard, Alain R. [4 ]
Hao, Junwei [1 ]
机构
[1] Tianjin Med Univ, Gen Hosp, Tianjin Neurol Inst, Dept Neurol, Tianjin 300052, Peoples R China
[2] Tianjin Med Univ, Lab Immunol & Inflammat, Res Ctr Basic Med Sci, Tianjin 300070, Peoples R China
[3] Tianjin Med Univ, Sch Pharm, Tianjin Key Lab Technol Enabling Dev Clin Therape, Tianjin 300070, Peoples R China
[4] Univ Moncton, Dept Chim & Biochim, Moncton, NB E1A 3E9, Canada
基金
中国国家自然科学基金;
关键词
LONG NONCODING RNAS; AUTOANTIBODIES; PROTEASOME; ALPHA;
D O I
10.1038/srep21819
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
The aim of our present study was to determine whether message RNAs (mRNAs) and long noncoding RNAs (lncRNAs) are expressed differentially in patients with Guillain-Barre syndrome (GBS) compared with healthy controls. The mRNA and lncRNA profiles of GBS patients and healthy controls were generated by using microarray analysis. From microarray analysis, we listed 310 mRNAs and 114 lncRNAs with the mRMR software classed into two sample groups, GBS patients and healthy controls. KEGG mapping demonstrated that the top seven signal pathways may play important roles in GBS development. Several GO terms, such as cytosol, cellular macromolecular complex assembly, cell cycle, ligase activity, protein catabolic process, etc., were enriched in gene lists, suggesting a potential correlation with GBS development. Co-expression network analysis indicated that 113 lncRNAs and 303 mRNAs were included in the co-expression network. Our present study showed that these differentially expressed mRNAs and lncRNAs may play important roles in GBS development, which provides basic information for defining the mechanism(s) that promote GBS.
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页数:11
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