Evaluation of a new real-time PCR assay for the direct detection of diarrheagenic Escherichia coli in stool specimens

被引:13
作者
Eigner, U. [1 ]
Hiergeist, A. [2 ]
Veldenzer, A. [1 ]
Rohlfs, M. [1 ]
Schwarz, R. [1 ]
Holfelder, M. [1 ]
机构
[1] Lab Limbach Heidelberg, Heidelberg, Germany
[2] Univ Hosp Regensburg, Inst Clin Microbiol & Hyg, Regensburg, Germany
关键词
Diarrheagenic E. coli; RIDA (R) GENE (RG) real-time multiplex PCR assays; Shiga toxin-producing E. coli (STEC); Enteropathogenic E. coil (EPEC); Enteroaggregative E. coli (EAEC); Enterotoxinogenic E. coli (ETEC); Enteroinvasive E. coli (EIEC); MULTIPLEX PCR; INFECTION; PATHOGENS; SAMPLES; PANEL;
D O I
10.1016/j.diagmicrobio.2017.01.016
中图分类号
R51 [传染病];
学科分类号
100401 ;
摘要
Diarrheagenic E. coli (DEC) are one of the most common causes for diarrhea worldwide, especially in children. We evaluated the rapid RIDA (R) GENE (RG) real-time multiplex PCR assays (R-Biopharm, Darmstadt, Germany) for the detection of the most important diarrheagenic E. coli. Three hundred fifteen liquid or non-formed stool specimens were examined. The results of the RG multiplex assays were compared to specific PCR methods. The sensitivity and specificity of the RG PCRs were as follows, 100%/100% for the detection of EHEC, 963% and 99% for EPEC, 100% and 100% for the detection of EAEC, ETEC and EIEC, respectively. Overall, the RG real-time PCR system for the detection of DEC tested in this study provided reliable and rapid results and shows the ability as a useful addendum for the detection of diarrheagenic E. coli in the medical laboratory. (C) 2017 Elsevier Inc. All rights reserved.
引用
收藏
页码:12 / 16
页数:5
相关论文
共 20 条
[1]   Infection strategies of enteric pathogenic Escherichia coli [J].
Clements, Abigail ;
Young, Joanna C. ;
Constantinou, Nicholas ;
Frankel, Gad .
GUT MICROBES, 2012, 3 (02) :71-87
[2]   Recent Advances in Understanding Enteric Pathogenic Escherichia coli [J].
Croxen, Matthew A. ;
Law, Robyn J. ;
Scholz, Roland ;
Keeney, Kristie M. ;
Wlodarska, Marta ;
Finlay, B. Brett .
CLINICAL MICROBIOLOGY REVIEWS, 2013, 26 (04) :822-880
[3]   Detection of Shiga toxin-producing and other diarrheagenic Escherichia coli by the BioFire FilmArray® Gastrointestinal Panel in human fecal samples [J].
De Rauw, K. ;
Detemmerman, L. ;
Breynaert, J. ;
Pierard, D. .
EUROPEAN JOURNAL OF CLINICAL MICROBIOLOGY & INFECTIOUS DISEASES, 2016, 35 (09) :1479-1486
[4]   Diarrheagenic enteroaggregative Escherichia coli causing urinary tract infection and bacteremia leading to sepsis [J].
Herzog, K. ;
Dusel, J. Engeler ;
Hugentobler, M. ;
Beutin, L. ;
Saegesser, G. ;
Stephan, R. ;
Haechler, H. ;
Nueesch-Inderbinen, M. .
INFECTION, 2014, 42 (02) :441-444
[5]   Enteropathogenic Escherichia coli: foe or innocent bystander? [J].
Hu, J. ;
Torres, A. G. .
CLINICAL MICROBIOLOGY AND INFECTION, 2015, 21 (08) :729-734
[6]   Epidemiology and Clinical Manifestations of Enteroaggregative Escherichia coli [J].
Jensen, Betina Hebbelstrup ;
Olsen, Katharina E. P. ;
Struve, Carsten ;
Krogfelt, Karen Angeliki ;
Petersen, Andreas Munk .
CLINICAL MICROBIOLOGY REVIEWS, 2014, 27 (03) :614-630
[7]   A GENETIC-LOCUS OF ENTEROPATHOGENIC ESCHERICHIA-COLI NECESSARY FOR THE PRODUCTION OF ATTACHING AND EFFACING LESIONS ON TISSUE-CULTURE CELLS [J].
JERSE, AE ;
YU, J ;
TALL, BD ;
KAPER, JB .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1990, 87 (20) :7839-7843
[8]   Pathogenic Escherichia coli [J].
Kaper, JB ;
Nataro, JP ;
Mobley, HLT .
NATURE REVIEWS MICROBIOLOGY, 2004, 2 (02) :123-140
[9]   Identification of unconventional intestinal pathogenic Escherichia coli isolates expressing intermediate virulence factor profiles by using a novel single-step multiplex PCR [J].
Mueller, Daniel ;
Greune, Lilo ;
Heusipp, Gerhard ;
Karch, Helge ;
Fruth, Angelika ;
Tschaepe, Helmut ;
Schmidt, M. Alexander .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2007, 73 (10) :3380-3390
[10]   Enteropathogenic Escherichia coli infection in children [J].
Ochoa, Theresa J. ;
Contreras, Carmen A. .
CURRENT OPINION IN INFECTIOUS DISEASES, 2011, 24 (05) :478-483