Meta-analysis uncovers genome-wide significant variants for rapid kidney function decline

被引:58
|
作者
Gorski, Mathias [1 ,2 ,3 ]
Jung, Bettina [3 ]
Li, Yong [4 ,5 ]
Matias-Garcia, Pamela R. [6 ,7 ,8 ]
Wuttke, Matthias [4 ,5 ,9 ]
Coassin, Stefan [10 ]
Thio, Chris H. L. [11 ]
Kleber, Marcus E. [12 ]
Winkler, Thomas W. [1 ,2 ]
Wanner, Veronika [1 ,2 ]
Chai, Jin-Fang [13 ,14 ]
Chu, Audrey Y. [15 ]
Cocca, Massimiliano [16 ]
Feitosa, Mary F. [17 ]
Ghasemi, Sahar [18 ,19 ]
Hoppmann, Anselm [4 ,5 ]
Horn, Katrin [20 ,21 ]
Li, Man [22 ]
Nutile, Teresa [23 ]
Scholz, Markus [20 ,21 ]
Sieber, Karsten B. [24 ]
Teumer, Alexander [18 ,19 ]
Tin, Adrienne [25 ,26 ]
Wang, Judy [17 ]
Tayo, Bamidele O. [27 ]
Ahluwalia, Tarunveer S. [28 ]
Almgren, Peter [29 ]
Bakker, Stephan J. L. [30 ]
Banas, Bernhard [3 ]
Bansal, Nisha [31 ,32 ]
Biggs, Mary L. [33 ,34 ]
Boerwinkle, Eric [35 ]
Bottinger, Erwin P. [36 ,37 ,38 ]
Brenner, Hermann [39 ,40 ]
Carroll, Robert J. [41 ]
Chalmers, John [42 ,43 ,44 ]
Chee, Miao-Li [45 ]
Chee, Miao-Ling [45 ]
Cheng, Ching-Yu [14 ,45 ,46 ,47 ]
Coresh, Josef [44 ]
de Borst, Martin H. [30 ]
Degenhardt, Frauke [48 ]
Eckardt, Kai-Uwe [49 ,50 ]
Endlich, Karlhans [19 ,51 ]
Franke, Andre [48 ]
Freitag-Wolf, Sandra [52 ]
Gampawar, Piyush [53 ]
Gansevoort, Ron T. [30 ]
Ghanbari, Mohsen [54 ,55 ]
Gieger, Christian [6 ,7 ,56 ]
机构
[1] Univ Regensburg, Dept Genet Epidemiol, Franz Josef Strauss Allee 11, D-93053 Regensburg, Germany
[2] Univ Hosp Regensburg, Dept Nephrol, Regensburg, Germany
[3] Univ Hosp Regensburg, Dept Nephrol, Freiburg, Germany
[4] Univ Freiburg, Fac Med, Dept Biometry Epidemiol & Med Bioinformat, Inst Genet Epidemiol, Freiburg, Germany
[5] Univ Freiburg, Med Ctr, Freiburg, Germany
[6] Helmholtz Zentrum Munchen, Res Unit Mol Epidemiol, German Res Ctr Environm Hlth, Neuherberg, Germany
[7] Helmholtz Zentrum Munchen, Inst Epidemiol, German Res Ctr Environm Hlth, Neuherberg, Germany
[8] Tech Univ Munich, TUM Sch Med, Munich, Germany
[9] Univ Freiburg, Fac Med, Dept Med 4, Renal Div, Freiburg, Germany
[10] Med Univ Innsbruck, Inst Genet Epidemiol, Dept Genet & Pharmacol, Innsbruck, Austria
[11] Univ Groningen, Univ Med Ctr Groningen, Dept Epidemiol, Groningen, Netherlands
[12] Heidelberg Univ, Med Fac Mannheim, Dept Med Nephrol Hypertensiol Rheumatol Endocrino, Mannheim, Germany
[13] Natl Univ Singapore, Saw Swee Hock Sch Publ Hlth, Singapore, Singapore
[14] Natl Univ Hlth Syst, Singapore, Singapore
[15] Merck & Co Inc, Genet, Kenilworth, NJ USA
[16] IRCCS Burlo Garofolo, Inst Maternal & Child Hlth, Trieste, Italy
[17] Washington Univ, Sch Med, Dept Genet, Div Stat Genom, St Louis, MO 63110 USA
[18] Univ Med Greifswald, Inst Community Med, Greifswald, Germany
[19] DZHK German Ctr Cardiovasc Res, Partner Site Greifswald, Greifswald, Germany
[20] Univ Leipzig, Inst Med Informat Stat & Epidemiol, Leipzig, Germany
[21] Univ Leipzig, LIFE Res Ctr Civilizat Dis, Leipzig, Germany
[22] Univ Utah, Dept Med, Div Nephrol & Hypertens, Salt Lake City, UT 84112 USA
[23] CNR, Inst Genet & Biophys Adriano Buzzati Traverso, Naples, Italy
[24] GlaxoSmithKline, Human Genet, Collegeville, PA USA
[25] Univ Mississippi, Med Ctr, Memory Impairment & Neurodegenerat Dementia MIND, Jackson, MS 39216 USA
[26] Univ Mississippi, Med Ctr, Dept Med, Div Nephrol, Jackson, MS 39216 USA
[27] Loyola Univ Chicago, Dept Publ Hlth Sci, Maywood, IL USA
[28] Steno Diabet Ctr Copenhagen, Gentofte, Denmark
[29] Lund Univ, Dept Clin Sci Malmo, Diabet & Cardiovasc Dis Genet Epidemiol, Malmo, Sweden
[30] Univ Groningen, Univ Med Ctr Groningen, Dept Internal Med, Div Nephrol, Groningen, Netherlands
[31] Univ Washington, Div Nephrol, Seattle, WA 98195 USA
[32] Univ Washington, Kidney Res Inst, Seattle, WA 98195 USA
[33] Univ Washington, Dept Med, Cardiovasc Hlth Res Unit, Seattle, WA USA
[34] Univ Washington, Dept Biostat, Seattle, WA 98195 USA
[35] Univ Texas Hlth Sci Ctr Houston, Human Genet Ctr, Houston, TX 77030 USA
[36] Icahn Sch Med Mt Sinai, Charles Bronfman Inst Personalized Med, New York, NY 10029 USA
[37] Hasso Plattner Inst, Digital Hlth Ctr, Potsdam, Germany
[38] Univ Potsdam, Potsdam, Germany
[39] German Canc Res Ctr, Div Clin Epidemiol & Aging Res, Heidelberg, Germany
[40] Heidelberg Univ, Network Aging Res, Heidelberg, Germany
[41] Vanderbilt Univ, Med Ctr, Dept Biomed Informat, Nashville, TN USA
[42] Univ New South Wales, George Inst Global Hlth, Sydney, NSW, Australia
[43] Univ Oxford, George Inst Global Hlth, Oxford, England
[44] Johns Hopkins Bloomberg Sch Publ Hlth, Dept Epidemiol, Baltimore, MD USA
[45] Singapore Natl Eye Ctr, Singapore Eye Res Inst, Singapore, Singapore
[46] Duke NUS Med Sch, Acad Clin Program Eye ACP, Ophthalmol & Visual Sci, Singapore, Singapore
[47] Natl Univ Singapore, Yong Loo Lin Sch Med, Dept Ophthalmol, Singapore, Singapore
[48] Christian AlbrechtsUniv Kiel, Inst Clin Mol Biol, Kiel, Germany
[49] Charite Univ Med Berlin, Dept Nephrol & Med Intens Care, Berlin, Germany
[50] Friedrich Alexander Univ Erlangen Nurnberg FAU, Dept Nephrol & Hypertens, Erlangen, Germany
关键词
acute kidney injury; end-stage kidney disease; genome-wide association study; rapid eGFRcrea decline; GLOMERULAR-FILTRATION-RATE; ASSOCIATION; DISEASE; TYPE-2; MORTALITY; LOCI; ALBUMINURIA; PROGRESSION; CKD;
D O I
10.1016/j.kint.2020.09.030
中图分类号
R5 [内科学]; R69 [泌尿科学(泌尿生殖系疾病)];
学科分类号
1002 ; 100201 ;
摘要
Rapid decline of glomerular filtration rate estimated from creatinine (eGFRcrea) is associated with severe clinical endpoints. In contrast to cross-sectionally assessed eGFRcrea, the genetic basis for rapid eGFRcrea decline is largely unknown. To help define this, we meta-analyzed 42 genome-wide association studies from the Chronic Kidney Diseases Genetics Consortium and United Kingdom Biobank to identify genetic loci for rapid eGFRcrea decline. Two definitions of eGFRcrea decline were used: 3 mL/min/1.73m(2)/year or more ("Rapid3"; encompassing 34,874 cases, 107,090 controls) and eGFRcrea decline 25% or more and eGFRcrea under 60 mL/min/1.73m(2) at follow-up among those with eGFRcrea 60 mL/min/1.73m(2) or more at baseline ("CKDi25"; encompassing 19,901 cases, 175,244 controls). Seven independent variants were identified across six loci for Rapid3 and/or CKDi25: consisting of five variants at four loci with genome-wide significance (near UMOD-PDILT (2), PRKAG2, WDR72, OR2S2) and two variants among 265 known eGFRcrea variants (near GATM, LARP4B). All these loci were novel for Rapid3 and/or CKDi25 and our bioinformatic follow-up prioritized variants and genes underneath these loci. The OR2S2 locus is novel for any eGFRcrea trait including interesting candidates. For the five genome-wide significant lead variants, we found supporting effects for annual change in blood urea nitrogen or cystatin-based eGFR, but not for GATM or (LARP4B). Individuals at high compared to those at low genetic risk (8-14 vs. 0-5 adverse alleles) had a 1.20-fold increased risk of acute kidney injury (95% confidence interval 1.08-1.33). Thus, our identified loci for rapid kidney function decline may help prioritize therapeutic targets and identify mechanisms and individuals at risk for sustained deterioration of kidney function.
引用
收藏
页码:926 / 939
页数:14
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