Mimicking enzymes: Cooperation between organic functional groups and metal ions in the cleavage of phosphate diesters

被引:88
|
作者
Livieri, Monica
Mancin, Fabrizio
Saielli, Giacomo
Chin, Jik
Tonellato, Umberto
机构
[1] Univ Padua, Dipartimento Sci Chim, I-35131 Padua, Italy
[2] Univ Padua, Ist CNR Tecnol Membrane, I-35131 Padua, Italy
[3] Univ Toronto, Dept Chem, Toronto, ON M5S 3H6, Canada
关键词
artificial nucleases; catalysis; hydrogen bonds; hydrolysis; phosphate diesters;
D O I
10.1002/chem.200600672
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
A series of ligands derived from the bis-2-pyridinylmethylamine structure, which bear either additional hydroxyl or aromatic amino groups, were prepared and their Zn-II complexes were studied as catalysts for the cleavage of bis-p-nitrophenyl phosphate (BNP) and 2-hydroxypropyl-p-nitrophenyl phosphate (HPNP) diesters. A comparative kinetic study indicated that the insertion of organic groups, capable of acting as nucleophiles or as hydrogen-bond donors, substantially increases the hydrolytic activity of the metal complex. Dissection of the effects of the individual groups revealed that the increase in reactivity can reach up to three orders of magnitude. The improved efficiency of the systems studied, combined with the benefits resulting from the low pK(a) value of the active nucleophile, result in an acceleration of the BNP cleavage at pH 7 of six orders of magnitude. The pH-dependent reactivity profiles follow a bell-shaped curve and the maximum reactivity is observed at pH 9. The mechanism of the reactions and the structure of the complexes were investigated in detail by means of kinetic analysis, NMR spectroscopy experiments, and theoretical calculations. The reactivity of the complexes that cleave HPNP closely resembles the reactivity observed for BNP, but the accelerations achieved are lower as a result of different reaction mechanisms.
引用
收藏
页码:2246 / 2256
页数:11
相关论文
共 50 条
  • [31] Efficient removal of phosphate from acidified urine using UiO-66 metal-organic frameworks with varying functional groups
    Guan, Tong
    Li, Xiaodi
    Fang, Wenkan
    Wu, Deyi
    APPLIED SURFACE SCIENCE, 2020, 501
  • [32] O-18 STUDIES TO DETERMINE POSITION OF BOND CLEAVAGE OF ACETYL PHOSPHATE IN PRESENCE OF DIVALENT METAL IONS
    KLINMAN, JP
    SAMUEL, D
    BIOCHEMISTRY, 1971, 10 (11) : 2126 - &
  • [33] Materials design by evolutionary optimization of functional groups in metal-organic frameworks
    Collins, Sean P.
    Daff, Thomas D.
    Piotrkowski, Sarah S.
    Woo, Tom K.
    SCIENCE ADVANCES, 2016, 2 (11):
  • [34] A Trypsin from Euphausia Pacifica (TEP B): Functional Groups and Effects of Metal Ions
    Xiang, Peng
    Wu, Zhiqiang
    Niu, Wentao
    Ye, Youyin
    Lin, Mao
    JOURNAL OF COASTAL RESEARCH, 2018, : 392 - 396
  • [35] Role of functional groups for the synthesis of nanomaterials within metal organic frameworks materials
    Tan, Kui
    Cure, Jeremy
    Jensen, Stephanie
    Feng, Liang
    Wang, Hao
    Li, Jing
    Thonhauser, Timo
    Zhou, Hongcai
    Chabal, Yves
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 2019, 258
  • [36] Computational Screening of Functional Groups for Ammonia Capture in Metal-Organic Frameworks
    Kim, Ki Chul
    Yu, Decai
    Snurr, Randall Q.
    LANGMUIR, 2013, 29 (05) : 1446 - 1456
  • [37] Protection and Deprotection Approach for the Introduction of Functional Groups into Metal-Organic Frameworks
    Yamada, Teppei
    Kitagawa, Hiroshi
    JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2009, 131 (18) : 6312 - +
  • [38] Chemical modification of silica surface by immobilization of functional groups for extractive concentration of metal ions
    Jal, PK
    Patel, S
    Mishra, B
    TALANTA, 2004, 62 (05) : 1005 - 1028
  • [39] IMMOBILIZATION OF GUANAZYL FUNCTIONAL GROUPS ON SILICA FOR SOLID-PHASE EXTRACTION OF METAL IONS
    Konshina, D. N.
    Furina, A. V.
    Temerdashev, Z. A.
    Gurinov, A. A.
    Konshin, V. V.
    ANALYTICAL LETTERS, 2014, 47 (16) : 2665 - 2681
  • [40] Quantifying Interactions between Biochemical Functional Groups and with Hofmeister Salt Ions in Water
    Cheng, Xian
    Cheng, Lixue
    Shkel, Irina
    Ben Knowles
    Connor, Kevin
    Buechel, Evan
    Molzahn, Cristen
    Mcclyman, Andrew
    Lambert, David
    Cochran, Hunter
    Thomas, Jr Record
    BIOPHYSICAL JOURNAL, 2016, 110 (03) : 51A - 51A